RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 LBX1P52954 281 aa12.16□□□□□ -0.46
SYN3-213ENST00000619146 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
SYN3-213ENST00000619146 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
SYN3-213ENST00000619146 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
SYN3-213ENST00000619146 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 U2AF1L5P0DN76 240 aaPredicted RBP12.15□□□□□ -0.46
SYN3-213ENST00000619146 VEGFBP49765 207 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 U2AF1Q01081 240 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYN3-213ENST00000619146 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
SYN3-213ENST00000619146 AIDAQ96BJ3 306 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 TAOK3Q9H2K8 898 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
SYN3-213ENST00000619146 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
SYN3-213ENST00000619146 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
SYN3-213ENST00000619146 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
SYN3-213ENST00000619146 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
SYN3-213ENST00000619146 PDE6BP35913 854 aa12.14□□□□□ -0.47
SYN3-213ENST00000619146 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
SYN3-213ENST00000619146 PRPF40BQ6NWY9 871 aaKnown RBP12.14□□□□□ -0.47
SYN3-213ENST00000619146 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
SYN3-213ENST00000619146 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
SYN3-213ENST00000619146 A1BGP04217 495 aa12.13□□□□□ -0.47
SYN3-213ENST00000619146 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
SYN3-213ENST00000619146 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
SYN3-213ENST00000619146 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 LTBP1Q14766 1721 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 STARD3NLO95772 234 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
SYN3-213ENST00000619146 GRM1Q13255 1194 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
SYN3-213ENST00000619146 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
SYN3-213ENST00000619146 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
SYN3-213ENST00000619146 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
SYN3-213ENST00000619146 TAF1P21675 1872 aa12.11□□□□□ -0.47
SYN3-213ENST00000619146 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
SYN3-213ENST00000619146 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
SYN3-213ENST00000619146 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
SYN3-213ENST00000619146 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
SYN3-213ENST00000619146 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
SYN3-213ENST00000619146 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 A0A087WZG4 1122 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 KCNQ3O43525 872 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 NEFMP07197 916 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 ST5P78524 1137 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYN3-213ENST00000619146 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
SYN3-213ENST00000619146 ITGBL1O95965 494 aaPredicted RBP12.09□□□□□ -0.47
SYN3-213ENST00000619146 SRGNP10124 158 aa12.09□□□□□ -0.47
SYN3-213ENST00000619146 HSPA8P11142 646 aaKnown RBP12.09□□□□□ -0.47
SYN3-213ENST00000619146 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYN3-213ENST00000619146 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
SYN3-213ENST00000619146 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
SYN3-213ENST00000619146 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
SYN3-213ENST00000619146 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
SYN3-213ENST00000619146 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
SYN3-213ENST00000619146 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
SYN3-213ENST00000619146 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 IQCA1LA6NCM1 817 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 TEFQ10587 303 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 NPM2Q86SE8 214 aaKnown RBP12.08□□□□□ -0.48
SYN3-213ENST00000619146 DZIP3Q86Y13 1208 aaKnown RBP12.08□□□□□ -0.48
SYN3-213ENST00000619146 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
SYN3-213ENST00000619146 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
SYN3-213ENST00000619146 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 COL4A5P29400 1685 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 EPHX2P34913 555 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 DEFB115Q30KQ5 88 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 NBPF5PQ86XG9 351 aaPredicted RBP12.07□□□□□ -0.48
SYN3-213ENST00000619146 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 HACL1Q9UJ83 578 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 LAMB2P55268 1798 aa12.07□□□□□ -0.48
SYN3-213ENST00000619146 AKAP11Q9UKA4 1901 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 SLC34A2O95436 690 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 PRKAR2BP31323 418 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
SYN3-213ENST00000619146 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SYN3-213ENST00000619146 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 CNTROBQ8N137 903 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
SYN3-213ENST00000619146 THSD7BQ9C0I4 1608 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms