RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 CYP27B1O15528 508 aa8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 RFX1P22670 979 aa8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 R3HCC1Q9Y3T6 440 aaKnown RBP8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 USP54Q70EL1 1684 aa8.49□□□□□ -1.05
SRGAP3-213ENST00000618999 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 F6X3S4 739 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 G2E3Q7L622 706 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 SYAP1Q96A49 352 aaPredicted RBP8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 PDCL3Q9H2J4 239 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 REC8O95072 547 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 BAG4O95429 457 aaKnown RBP8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 MCCP23508 829 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 ANXA1P04083 346 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 NGLY1Q96IV0 654 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 SLC52A2Q9HAB3 445 aa8.48□□□□□ -1.05
SRGAP3-213ENST00000618999 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 CEMIPQ8WUJ3 1361 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 CAMTA1Q9Y6Y1 1673 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 FLIIQ13045 1269 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 MEGF6O75095 1541 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 GAS2L3Q86XJ1 694 aa8.47□□□□□ -1.05
SRGAP3-213ENST00000618999 LTBP4Q8N2S1 1624 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 EXOC5O00471 708 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 ZNF790Q6PG37 636 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 FAM212AQ96EL1 285 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 C8orf37Q96NL8 207 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 PTPRCP08575 1304 aa8.46□□□□□ -1.05
SRGAP3-213ENST00000618999 RBM10P98175 930 aaKnown RBP8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 PDE4DQ08499 809 aa8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 KIAA2012Q0VF49 1180 aa8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 AIMP1Q12904 312 aaKnown RBP8.46□□□□□ -1.06
SRGAP3-213ENST00000618999 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 RGPD2P0DJD1 1756 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 HMMRO75330 724 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 AK7Q96M32 723 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PHAXQ9H814 394 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 ROBO1Q9Y6N7 1651 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PDE4CQ08493 712 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 CLEC11AQ9Y240 323 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PHRF1Q9P1Y6 1649 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PRAMEF22A3QJZ6 481 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 PHF14O94880 888 aa8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 MEX3CQ5U5Q3 659 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 MTERF4Q7Z6M4 381 aaKnown RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 ZNF496Q96IT1 587 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 DBF4Q9UBU7 674 aaPredicted RBP8.45□□□□□ -1.06
SRGAP3-213ENST00000618999 NCAPD2Q15021 1401 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 SOS1Q07889 1333 aaPredicted RBP8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 ERBB4Q15303 1308 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 MBD3O95983 291 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 MYL6BP14649 208 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 OFD1O75665 1012 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 FMNL2Q96PY5 1086 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 TMOD3Q9NYL9 352 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 ABCC4O15439 1325 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 HOXB7P09629 217 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 CCT4P50991 539 aaKnown RBP8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 ZSCAN23Q3MJ62 389 aa8.44□□□□□ -1.06
SRGAP3-213ENST00000618999 PPP1R9BQ96SB3 815 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 UQCRHLA0A096LP55 91 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 UQCRHP07919 91 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 SNRPA1P09661 255 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 NOL8Q76FK4 1167 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 RNF214Q8ND24 703 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 PI4KAP2A4QPH2 592 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 HMGB1P09429 215 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 DDB1Q16531 1140 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 HS1BP3Q53T59 392 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 PI4KAP1Q8N8J0 262 aa8.43□□□□□ -1.06
SRGAP3-213ENST00000618999 PIP4K2AP48426 406 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 MEIS3Q99687 375 aa8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 OVOS2A0A0G2JMS6 1433 aa8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 DDX58O95786 925 aaKnown RBP8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 USP16Q9Y5T5 823 aa8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
SRGAP3-213ENST00000618999 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms