RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	DIAPH3	Q9NSV4	1193 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	PRIM1	P49642	420 aa	Known RBP	13.55	□□□□□ -0.24
TP53-223	ENST00000618944	MTX1	Q13505	466 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	ZNF790	Q6PG37	636 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	LINS1	Q8NG48	757 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	INTS4	Q96HW7	963 aa	Known RBP	13.55	□□□□□ -0.24
TP53-223	ENST00000618944	GDPD2	Q9HCC8	539 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	ECHDC1	Q9NTX5	307 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	RAD50	Q92878	1312 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	DDX58	O95786	925 aa	Known RBP	13.54	□□□□□ -0.24
TP53-223	ENST00000618944	CSB-PGBD3	P0DP91	1061 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	ZNF445	P59923	1031 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	PTH1R	Q03431	593 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	TPRN	Q4KMQ1	711 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	DDX54	Q8TDD1	881 aa	Known RBP	13.54	□□□□□ -0.24
TP53-223	ENST00000618944	C19orf44	Q9H6X5	657 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	ERBB3	P21860	1342 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	CACNA1F	O60840	1977 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	HEG1	Q9ULI3	1381 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	ERBB4	Q15303	1308 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	TTC41P	Q6P2S7	1318 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	2e-6	■□□□□ 9.5
TP53-223	ENST00000618944	CHRNA2	Q15822	529 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	RBSN	Q9H1K0	784 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	TMEM63C	Q9P1W3	806 aa		13.54	□□□□□ -0.24
TP53-223	ENST00000618944	SASH1	O94885	1247 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	IGKV5-2	P06315	115 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	AK2	P54819	239 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	XAGE3	Q8WTP9	111 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	SYCE3	A1L190	88 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	ESPN	B1AK53	854 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	COPS6	Q7L5N1	327 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	EAF2	Q96CJ1	260 aa	Predicted RBP	13.53	□□□□□ -0.24
TP53-223	ENST00000618944	IL17RA	Q96F46	866 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	SLC52A2	Q9HAB3	445 aa		13.53	□□□□□ -0.24
TP53-223	ENST00000618944	USP42	Q9H9J4	1324 aa	Known RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	TAT	P17735	454 aa	Predicted RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	CAST	P20810	708 aa	Known RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	PRPF40B	Q6NWY9	871 aa	Known RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	ERC1	Q8IUD2	1116 aa		13.52	□□□□□ -0.24
TP53-223	ENST00000618944	ANP32B	Q92688	251 aa	Known RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	GPATCH3	Q96I76	525 aa		13.52	□□□□□ -0.24
TP53-223	ENST00000618944	MYD88	Q99836	296 aa		13.52	□□□□□ -0.24
TP53-223	ENST00000618944	TLR7	Q9NYK1	1049 aa	Known RBP	13.52	□□□□□ -0.24
TP53-223	ENST00000618944	RUFY3	Q7L099	469 aa		13.52	□□□□□ -0.25
TP53-223	ENST00000618944	ZNF496	Q96IT1	587 aa	Predicted RBP	13.52	□□□□□ -0.25
TP53-223	ENST00000618944	BOLA2	Q9H3K6	86 aa		13.52	□□□□□ -0.25
TP53-223	ENST00000618944	HDAC5	Q9UQL6	1122 aa		13.52	□□□□□ -0.25
TP53-223	ENST00000618944	USP16	Q9Y5T5	823 aa		13.52	□□□□□ -0.25
TP53-223	ENST00000618944	NCAPD2	Q15021	1401 aa		13.52	□□□□□ -0.25
TP53-223	ENST00000618944	KDM3B	Q7LBC6	1761 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	EPB41L2	O43491	1005 aa	Known RBP	13.51	□□□□□ -0.25
TP53-223	ENST00000618944	PHKG2	P15735	406 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	ATF3	P18847	181 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	CLCN1	P35523	988 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	ADCK5	Q3MIX3	580 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	FAM227B	Q96M60	508 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	TTC14	Q96N46	770 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	NPHP3	Q7Z494	1330 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	C1orf167	Q5SNV9	1468 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	EPHA10	Q5JZY3	1008 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	UBE2Q2	Q8WVN8	375 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	RUFY2	Q8WXA3	655 aa		13.51	□□□□□ -0.25
TP53-223	ENST00000618944	GADD45B	O75293	160 aa	Predicted RBP	13.5	□□□□□ -0.25
TP53-223	ENST00000618944	CCDC173	Q0VFZ6	552 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	NEXN	Q0ZGT2	675 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	LARP1	Q6PKG0	1096 aa	Known RBP	13.5	□□□□□ -0.25
TP53-223	ENST00000618944	EVI5L	Q96CN4	794 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	JAKMIP1	Q96N16	626 aa	Known RBP	13.5	□□□□□ -0.25
TP53-223	ENST00000618944	LIMCH1	Q9UPQ0	1083 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	SLIT3	O75094	1523 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	LMO7	Q8WWI1	1683 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	TUBGCP6	Q96RT7	1819 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	NEURL1B	A8MQ27	555 aa		13.5	□□□□□ -0.25
TP53-223	ENST00000618944	LARGE1	O95461	756 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	KCNJ4	P48050	445 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	GCKR	Q14397	625 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	USP48	Q86UV5	1035 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	WDR33	Q9C0J8	1336 aa	Known RBP	13.49	□□□□□ -0.25
TP53-223	ENST00000618944	NMI	Q13287	307 aa	Predicted RBP	13.49	□□□□□ -0.25
TP53-223	ENST00000618944	IFNL2	Q8IZJ0	200 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	PPP1R9B	Q96SB3	815 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	PDRG1	Q9NUG6	133 aa		13.49	□□□□□ -0.25
TP53-223	ENST00000618944	UTY	O14607	1347 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	ATP5J2-PTCD1	G3V325	749 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	PTCD1	O75127	700 aa	Known RBP	13.48	□□□□□ -0.25
TP53-223	ENST00000618944	ANKRD13D	Q6ZTN6	518 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	CCDC83	Q8IWF9	413 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	TTC5	Q8N0Z6	440 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	RNF214	Q8ND24	703 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	CYP27B1	O15528	508 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	LRSAM1	Q6UWE0	723 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	EDC3	Q96F86	508 aa	Known RBP	13.48	□□□□□ -0.25
TP53-223	ENST00000618944	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.48	□□□□□ -0.25
TP53-223	ENST00000618944	METTL22	Q9BUU2	404 aa	Predicted RBP	13.48	□□□□□ -0.25
TP53-223	ENST00000618944	SMC3	Q9UQE7	1217 aa		13.48	□□□□□ -0.25
TP53-223	ENST00000618944	KDM6A	O15550	1401 aa	Predicted RBP	13.47	□□□□□ -0.25
TP53-223	ENST00000618944	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.47	□□□□□ -0.25
TP53-223	ENST00000618944	MBD3	O95983	291 aa		13.47	□□□□□ -0.25
TP53-223	ENST00000618944	COL9A3	Q14050	684 aa	Predicted RBP	13.47	□□□□□ -0.25

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