RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 ADCY9O60503 1353 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 KDM4AO75164 1064 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 BCAR3O75815 825 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
CBWD3-214ENST00000618921 MTHFSP49914 203 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
CBWD3-214ENST00000618921 NME9Q86XW9 330 aa8.79□□□□□ -1
CBWD3-214ENST00000618921 PSEN1P49768 467 aa8.78□□□□□ -1
CBWD3-214ENST00000618921 APLP1P51693 650 aa8.78□□□□□ -1
CBWD3-214ENST00000618921 MYH16Q9H6N6 1097 aa8.78□□□□□ -1
CBWD3-214ENST00000618921 TNNT2P45379 298 aaPredicted RBP8.78□□□□□ -1
CBWD3-214ENST00000618921 LTV1Q96GA3 475 aaPredicted RBP8.78□□□□□ -1
CBWD3-214ENST00000618921 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
CBWD3-214ENST00000618921 USP31Q70CQ4 1352 aa8.78□□□□□ -1
CBWD3-214ENST00000618921 UNCXA6NJT0 531 aa8.77□□□□□ -1.01
CBWD3-214ENST00000618921 CT47B1P0C2W7 299 aaPredicted RBP8.77□□□□□ -1.01
CBWD3-214ENST00000618921 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1.01
CBWD3-214ENST00000618921 TERF2IPQ9NYB0 399 aa8.77□□□□□ -1.01
CBWD3-214ENST00000618921 MAPK8IP3Q9UPT6 1336 aa8.77□□□□□ -1.01
CBWD3-214ENST00000618921 RARSP54136 660 aaKnown RBP8.76□□□□□ -1.01
CBWD3-214ENST00000618921 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
CBWD3-214ENST00000618921 ZCRB1Q8TBF4 217 aaKnown RBP8.76□□□□□ -1.01
CBWD3-214ENST00000618921 IP6K1Q92551 441 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 LY75O60449 1722 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 KCNA1Q09470 495 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 C8orf34Q49A92 452 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 RNF39Q9H2S5 420 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 COG6Q9Y2V7 657 aa8.76□□□□□ -1.01
CBWD3-214ENST00000618921 ANKRD26Q9UPS8 1709 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 TOMM70O94826 608 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 U2AF1L5P0DN76 240 aaPredicted RBP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 U2AF1Q01081 240 aaKnown RBP eCLIP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 SMIM5Q71RC9 77 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 PNNQ9H307 717 aaKnown RBP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 A0A1W2PP64 1363 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 IGSF1Q8N6C5 1336 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 LTN1O94822 1766 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 SH3D19Q5HYK7 790 aa8.75□□□□□ -1.01
CBWD3-214ENST00000618921 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
CBWD3-214ENST00000618921 DSG3P32926 999 aa8.74□□□□□ -1.01
CBWD3-214ENST00000618921 RGS3P49796 1198 aa8.74□□□□□ -1.01
CBWD3-214ENST00000618921 AMIGO3Q86WK7 504 aa8.74□□□□□ -1.01
CBWD3-214ENST00000618921 BRD1O95696 1058 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 FBLN1P23142 703 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 HTRA3P83110 453 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 PANK1Q8TE04 598 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 FRAT1Q92837 279 aaPredicted RBP8.73□□□□□ -1.01
CBWD3-214ENST00000618921 IL16Q14005 1332 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 COL3A1P02461 1466 aaPredicted RBP8.73□□□□□ -1.01
CBWD3-214ENST00000618921 DPYSL4O14531 572 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 IGHDP01880 384 aa8.73□□□□□ -1.01
CBWD3-214ENST00000618921 DOT1LQ8TEK3 1739 aa8.72□□□□□ -1.01
CBWD3-214ENST00000618921 NMRK2Q9NPI5 230 aa8.72□□□□□ -1.01
CBWD3-214ENST00000618921 SMARCA5O60264 1052 aaPredicted RBP8.71□□□□□ -1.01
CBWD3-214ENST00000618921 NEFMP07197 916 aa8.71□□□□□ -1.01
CBWD3-214ENST00000618921 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.01
CBWD3-214ENST00000618921 TEX2Q8IWB9 1127 aa8.71□□□□□ -1.01
CBWD3-214ENST00000618921 PLEKHF1Q96S99 279 aa8.71□□□□□ -1.01
CBWD3-214ENST00000618921 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.01
CBWD3-214ENST00000618921 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.01
CBWD3-214ENST00000618921 CD163L1Q9NR16 1453 aa8.71□□□□□ -1.01
CBWD3-214ENST00000618921 VIRMAQ69YN4 1812 aaKnown RBP8.71□□□□□ -1.02
CBWD3-214ENST00000618921 FYB1O15117 783 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 PHF14O94880 888 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 PRR29P0C7W0 189 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 HMGB2P26583 209 aaKnown RBP8.71□□□□□ -1.02
CBWD3-214ENST00000618921 HOXC9P31274 260 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.02
CBWD3-214ENST00000618921 NBPF6Q5VWK0 638 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 JMYQ8N9B5 988 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 NBPF4Q96M43 638 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 MON2Q7Z3U7 1717 aa8.71□□□□□ -1.02
CBWD3-214ENST00000618921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
CBWD3-214ENST00000618921 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
CBWD3-214ENST00000618921 DIAPH1O60610 1272 aaKnown RBP8.7□□□□□ -1.02
CBWD3-214ENST00000618921 AMPHP49418 695 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 SPATA32Q96LK8 384 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 MAP3K19Q56UN5 1328 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
CBWD3-214ENST00000618921 GNPATO15228 680 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 PRELPP51888 382 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 MVPQ14764 893 aaKnown RBP8.7□□□□□ -1.02
CBWD3-214ENST00000618921 PDIA6Q15084 440 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
CBWD3-214ENST00000618921 RGPD2P0DJD1 1756 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 A0A0G2JLW4 131 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms