RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ADAMTS2O95450 1211 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 TATP17735 454 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 LRSAM1Q6UWE0 723 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 FEZ1Q99689 392 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 OGFRQ9NZT2 677 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 LRRFIP2Q9Y608 721 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 FYB1O15117 783 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 UBAC1Q9BSL1 405 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 SLC12A7Q9Y666 1083 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 TOM1L2Q6ZVM7 507 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 JAKMIP3Q5VZ66 844 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 CDK5RAP3Q96JB5 506 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 GOLGA6L7A0A1B0GV03 622 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 TOP1P11387 765 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 PDE1AP54750 535 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 GRM1Q13255 1194 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 CFAP100Q494V2 611 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 NKTRP30414 1462 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 C16orf71Q8IYS4 520 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 C8orf76Q96K31 380 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 VAMP4O75379 141 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 CCDC178Q5BJE1 867 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 KIAA1328Q86T90 577 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 ZGPATQ8N5A5 531 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 TAF4BQ92750 862 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 A6NNZ2 444 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 TUBB8Q3ZCM7 444 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 CATIPQ7Z7H3 387 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 CDK13Q14004 1512 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 ZNF521Q96K83 1311 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 SKILP12757 684 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 GBP2P32456 591 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 ZNF165P49910 485 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 KRT28Q7Z3Y7 464 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 MPHOSPH8Q99549 860 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.54□□□□□ -1.84
LPP-221ENST00000618621 ARHGAP29Q52LW3 1261 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 KRT222Q8N1A0 295 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 DDX19AQ9NUU7 478 aaKnown RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 ZBTB7BO15156 539 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 ATL3Q6DD88 541 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 C8orf58Q8NAV2 365 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 ARHGAP5Q13017 1502 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 OTUD7AQ8TE49 926 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 TANGO6Q9C0B7 1094 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 RNF41Q9H4P4 317 aaPredicted RBP3.54□□□□□ -1.84
LPP-221ENST00000618621 A0A087WZG4 1122 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 STARD3NLO95772 234 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 DAPK1P53355 1430 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 IL1RAPL2Q9NP60 686 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 CNNM1Q9NRU3 951 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ZNF213O14771 459 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 SKIDA1Q1XH10 827 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ZNF530Q6P9A1 599 aaPredicted RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 CCDC102AQ96A19 550 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ARHGEF11O15085 1522 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 URI1O94763 535 aaPredicted RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 ZNF287Q9HBT7 754 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 USP16Q9Y5T5 823 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 DISP3Q9P2K9 1392 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ANKRD18AQ8IVF6 992 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 EHBP1Q8NDI1 1231 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 USP19O94966 1318 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 IFIT5Q13325 482 aaKnown RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 SSRP1Q08945 709 aaKnown RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 CHRNA2Q15822 529 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 KCNH5Q8NCM2 988 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 CKAP2LQ8IYA6 745 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 DNAAF4Q8WXU2 420 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 TSG101Q99816 390 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 CRACR2AQ9BSW2 395 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 MBIPQ9NS73 344 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 V9GYY5 206 aaPredicted RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 FKBP15Q5T1M5 1219 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 AMPD3Q01432 767 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 NEK1Q96PY6 1258 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 MAP4K4O95819 1239 aaPredicted RBP3.53□□□□□ -1.84
LPP-221ENST00000618621 TSPYL6Q8N831 410 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 CLEC11AQ9Y240 323 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 NECAB1Q8N987 351 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 POLR3EQ9NVU0 708 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 LRP2BPQ9P2M1 347 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 TYRO3Q06418 890 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 PTGS1P23219 599 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ZNF75DP51815 510 aa3.53□□□□□ -1.84
LPP-221ENST00000618621 ABCA10Q8WWZ4 1543 aa3.53□□□□□ -1.85
LPP-221ENST00000618621 IVLP07476 585 aa3.53□□□□□ -1.85
LPP-221ENST00000618621 MCMDC2Q4G0Z9 681 aa3.53□□□□□ -1.85
LPP-221ENST00000618621 CCDC150Q8NCX0 1101 aa3.53□□□□□ -1.85
LPP-221ENST00000618621 SEPT7Q16181 437 aaKnown RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 MYRIPQ8NFW9 859 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 ZNF622Q969S3 477 aaKnown RBP eCLIP3.52□□□□□ -1.85
LPP-221ENST00000618621 CENPHQ9H3R5 247 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 USP25Q9UHP3 1055 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 PDE4DIPQ5VU43 2346 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 HCLS1P14317 486 aaPredicted RBP3.52□□□□□ -1.85
LPP-221ENST00000618621 ANKRD44Q8N8A2 993 aa3.52□□□□□ -1.85
LPP-221ENST00000618621 PHACTR3Q96KR7 559 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms