RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MAP3K15Q6ZN16 1313 aa29.01■■■□□ 2.23
CBWD3-213ENST00000618217 RCAN3Q9UKA8 241 aa29.01■■■□□ 2.23
CBWD3-213ENST00000618217 BCL2L12Q9HB09 334 aa29■■■□□ 2.23
CBWD3-213ENST00000618217 NUP98P52948 1817 aa29■■■□□ 2.23
CBWD3-213ENST00000618217 ERVV-1B6SEH8 477 aa28.99■■■□□ 2.23
CBWD3-213ENST00000618217 USPL1Q5W0Q7 1092 aa28.99■■■□□ 2.23
CBWD3-213ENST00000618217 ARXQ96QS3 562 aa28.99■■■□□ 2.23
CBWD3-213ENST00000618217 ZPR1O75312 459 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 KIF6Q6ZMV9 814 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 ANKRD13DQ6ZTN6 518 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 RGL2O15211 777 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 MSH5O43196 834 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 GYS1P13807 737 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 PLBD2Q8NHP8 589 aa28.98■■■□□ 2.23
CBWD3-213ENST00000618217 ZBTB3Q9H5J0 574 aa28.97■■■□□ 2.23
CBWD3-213ENST00000618217 ADCY9O60503 1353 aa28.96■■■□□ 2.23
CBWD3-213ENST00000618217 ARFGEF2Q9Y6D5 1785 aa28.96■■■□□ 2.23
CBWD3-213ENST00000618217 HLFQ16534 295 aa28.96■■■□□ 2.23
CBWD3-213ENST00000618217 SLC16A10Q8TF71 515 aa28.96■■■□□ 2.23
CBWD3-213ENST00000618217 FKBP5Q13451 457 aaPredicted RBP28.94■■■□□ 2.22
CBWD3-213ENST00000618217 CLEC4GQ6UXB4 293 aa28.94■■■□□ 2.22
CBWD3-213ENST00000618217 KSR2Q6VAB6 950 aa28.94■■■□□ 2.22
CBWD3-213ENST00000618217 NOB1Q9ULX3 412 aaKnown RBP28.94■■■□□ 2.22
CBWD3-213ENST00000618217 PI4KAP2A4QPH2 592 aa28.94■■■□□ 2.22
CBWD3-213ENST00000618217 DDX58O95786 925 aaKnown RBP28.94■■■□□ 2.22
CBWD3-213ENST00000618217 FKBP8Q14318 412 aa28.94■■■□□ 2.22
CBWD3-213ENST00000618217 GIGYF2Q6Y7W6 1299 aaKnown RBP28.94■■■□□ 2.22
CBWD3-213ENST00000618217 PI4KAP1Q8N8J0 262 aa28.94■■■□□ 2.22
CBWD3-213ENST00000618217 PTPRCP08575 1304 aa28.93■■■□□ 2.22
CBWD3-213ENST00000618217 COL24A1Q17RW2 1714 aa28.93■■■□□ 2.22
CBWD3-213ENST00000618217 KIF16BQ96L93 1317 aa28.92■■■□□ 2.22
CBWD3-213ENST00000618217 ANKRD36CQ5JPF3 1778 aa28.91■■■□□ 2.22
CBWD3-213ENST00000618217 RIC3Q7Z5B4 369 aa28.91■■■□□ 2.22
CBWD3-213ENST00000618217 NLGN1Q8N2Q7 840 aa28.91■■■□□ 2.22
CBWD3-213ENST00000618217 ARHGAP45Q92619 1136 aa28.91■■■□□ 2.22
CBWD3-213ENST00000618217 MAP3K2Q9Y2U5 619 aa28.91■■■□□ 2.22
CBWD3-213ENST00000618217 ZNF652Q9Y2D9 606 aa28.9■■■□□ 2.22
CBWD3-213ENST00000618217 ATP10DQ9P241 1426 aa28.89■■■□□ 2.22
CBWD3-213ENST00000618217 F6X3S4 739 aa28.88■■■□□ 2.21
CBWD3-213ENST00000618217 TM4SF1P30408 202 aa28.88■■■□□ 2.21
CBWD3-213ENST00000618217 TCIRG1Q13488 830 aa28.88■■■□□ 2.21
CBWD3-213ENST00000618217 TBC1D9BQ66K14 1250 aa28.88■■■□□ 2.21
CBWD3-213ENST00000618217 METTL22Q9BUU2 404 aaPredicted RBP28.88■■■□□ 2.21
CBWD3-213ENST00000618217 MSL1Q68DK7 614 aa28.87■■■□□ 2.21
CBWD3-213ENST00000618217 ZNF34Q8IZ26 560 aa28.87■■■□□ 2.21
CBWD3-213ENST00000618217 ZBTB7AO95365 584 aa28.87■■■□□ 2.21
CBWD3-213ENST00000618217 DNAAF4Q8WXU2 420 aa28.87■■■□□ 2.21
CBWD3-213ENST00000618217 MTFR1LQ9H019 292 aa28.87■■■□□ 2.21
CBWD3-213ENST00000618217 IPO8O15397 1037 aaKnown RBP28.86■■■□□ 2.21
CBWD3-213ENST00000618217 NFIXQ14938 502 aa28.86■■■□□ 2.21
CBWD3-213ENST00000618217 FRAT1Q92837 279 aaPredicted RBP28.86■■■□□ 2.21
CBWD3-213ENST00000618217 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
CBWD3-213ENST00000618217 TRIM27P14373 513 aa28.84■■■□□ 2.21
CBWD3-213ENST00000618217 HSP90AB3PQ58FF7 597 aa28.84■■■□□ 2.21
CBWD3-213ENST00000618217 ATF7IPQ6VMQ6 1270 aa28.84■■■□□ 2.21
CBWD3-213ENST00000618217 API5Q9BZZ5 524 aaKnown RBP28.84■■■□□ 2.21
CBWD3-213ENST00000618217 CENPBP07199 599 aaPredicted RBP28.83■■■□□ 2.21
CBWD3-213ENST00000618217 ZKSCAN2Q63HK3 967 aa28.83■■■□□ 2.21
CBWD3-213ENST00000618217 TRIM28Q13263 835 aaKnown RBP28.83■■■□□ 2.21
CBWD3-213ENST00000618217 MYD88Q99836 296 aa28.83■■■□□ 2.21
CBWD3-213ENST00000618217 TNNQ9UQP3 1299 aa28.83■■■□□ 2.21
CBWD3-213ENST00000618217 NIP7Q9Y221 180 aaKnown RBP eCLIP28.83■■■□□ 2.21
CBWD3-213ENST00000618217 UBN2Q6ZU65 1347 aa28.83■■■□□ 2.21
CBWD3-213ENST00000618217 IGKV5-2P06315 115 aa28.82■■■□□ 2.2
CBWD3-213ENST00000618217 DDR1Q08345 913 aa28.82■■■□□ 2.2
CBWD3-213ENST00000618217 ATF5Q9Y2D1 282 aaPredicted RBP28.82■■■□□ 2.2
CBWD3-213ENST00000618217 ATP5J2-PTCD1G3V325 749 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 MMP10P09238 476 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 GPTP24298 496 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 BEND3Q5T5X7 828 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 BICDL1Q6ZP65 573 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 SETDB2Q96T68 719 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 SGIP1Q9BQI5 828 aa28.81■■■□□ 2.2
CBWD3-213ENST00000618217 N4BP2Q86UW6 1770 aaPredicted RBP28.8■■■□□ 2.2
CBWD3-213ENST00000618217 PXDNLA1KZ92 1463 aa28.8■■■□□ 2.2
CBWD3-213ENST00000618217 ABCC4O15439 1325 aa28.8■■■□□ 2.2
CBWD3-213ENST00000618217 NLRP10Q86W26 655 aa28.8■■■□□ 2.2
CBWD3-213ENST00000618217 AFDNP55196 1824 aaKnown RBP28.79■■■□□ 2.2
CBWD3-213ENST00000618217 POLRMTO00411 1230 aaKnown RBP28.79■■■□□ 2.2
CBWD3-213ENST00000618217 PLIN1O60240 522 aa28.79■■■□□ 2.2
CBWD3-213ENST00000618217 NEXNQ0ZGT2 675 aa28.79■■■□□ 2.2
CBWD3-213ENST00000618217 LINS1Q8NG48 757 aa28.79■■■□□ 2.2
CBWD3-213ENST00000618217 PTGER2P43116 358 aa28.78■■■□□ 2.2
CBWD3-213ENST00000618217 SLC4A10Q6U841 1118 aa28.78■■■□□ 2.2
CBWD3-213ENST00000618217 NRXN2Q9P2S2 1712 aa28.78■■■□□ 2.2
CBWD3-213ENST00000618217 CARMIL3Q8ND23 1372 aa28.77■■■□□ 2.2
CBWD3-213ENST00000618217 NEURL1BA8MQ27 555 aa28.77■■■□□ 2.2
CBWD3-213ENST00000618217 CWF19L2Q2TBE0 894 aaKnown RBP28.77■■■□□ 2.2
CBWD3-213ENST00000618217 PARP10Q53GL7 1025 aa28.76■■■□□ 2.2
CBWD3-213ENST00000618217 SUSD4Q5VX71 490 aa28.76■■■□□ 2.2
CBWD3-213ENST00000618217 CCDC191Q8NCU4 936 aa28.76■■■□□ 2.2
CBWD3-213ENST00000618217 RNF123Q5XPI4 1314 aa28.76■■■□□ 2.19
CBWD3-213ENST00000618217 CLUAP1Q96AJ1 413 aa28.76■■■□□ 2.19
CBWD3-213ENST00000618217 RLBP1P12271 317 aa28.75■■■□□ 2.19
CBWD3-213ENST00000618217 SERPINB2P05120 415 aa28.74■■■□□ 2.19
CBWD3-213ENST00000618217 INTS3Q68E01 1043 aaKnown RBP28.74■■■□□ 2.19
CBWD3-213ENST00000618217 SPON1Q9HCB6 807 aa28.74■■■□□ 2.19
CBWD3-213ENST00000618217 IBTKQ9P2D0 1353 aaPredicted RBP28.74■■■□□ 2.19
CBWD3-213ENST00000618217 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
CBWD3-213ENST00000618217 RRP1P56182 461 aaKnown RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms