RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	RTF1	Q92541	710 aa	Known RBP	10.86	□□□□□ -0.67
TGIF1-223	ENST00000618001	IFFO2	Q5TF58	517 aa		10.86	□□□□□ -0.67
TGIF1-223	ENST00000618001	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.86	□□□□□ -0.67
TGIF1-223	ENST00000618001	TBC1D2B	Q9UPU7	963 aa		10.86	□□□□□ -0.67
TGIF1-223	ENST00000618001	GLTPD2	A6NH11	291 aa		10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	DZIP3	Q86Y13	1208 aa	Known RBP	10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	SETDB2	Q96T68	719 aa		10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	BICDL1	Q6ZP65	573 aa		10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	CNBD1	Q8NA66	436 aa		10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	USP16	Q9Y5T5	823 aa		10.85	□□□□□ -0.67
TGIF1-223	ENST00000618001	KLRG2	A4D1S0	409 aa	Predicted RBP	10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	ST5	P78524	1137 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	MCM10	Q7L590	875 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	DLG5	Q8TDM6	1919 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	SRGN	P10124	158 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	RRAGC	Q9HB90	399 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	ZNF652	Q9Y2D9	606 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	SOGA3	Q5TF21	947 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	NPM2	Q86SE8	214 aa	Known RBP	10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	SMC1B	Q8NDV3	1235 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	PLEKHF1	Q96S99	279 aa		10.84	□□□□□ -0.67
TGIF1-223	ENST00000618001	TAF7	Q15545	349 aa	Predicted RBP	10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	PNISR	Q8TF01	805 aa	Known RBP	10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	CNKSR1	Q969H4	720 aa		10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	RIC1	Q4ADV7	1423 aa		10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	CCDC88A	Q3V6T2	1871 aa		10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	PRAMEF22	A3QJZ6	481 aa		10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	CNGB1	Q14028	1251 aa	Predicted RBP	10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	MASTL	Q96GX5	879 aa		10.83	□□□□□ -0.68
TGIF1-223	ENST00000618001	NBPF26	B4DH59	902 aa		10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	NBPF10	Q6P3W6	841 aa	Known RBP	10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	NBPF15	Q8N660	670 aa		10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	SLX4	Q8IY92	1834 aa		10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	VEGFA	P15692	232 aa	Predicted RBP	10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	JMY	Q8N9B5	988 aa		10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.82	□□□□□ -0.68
TGIF1-223	ENST00000618001	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	1e-8	■□□□□ 8.5
TGIF1-223	ENST00000618001	PRPF40B	Q6NWY9	871 aa	Known RBP	10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	C7orf43	Q8WVR3	580 aa		10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	CACNA1S	Q13698	1873 aa		10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	C21orf2	O43822	256 aa		10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	DCTN1	Q14203	1278 aa		10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	KLRG1	Q96E93	195 aa		10.81	□□□□□ -0.68
TGIF1-223	ENST00000618001	POTEC	B2RU33	542 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	NPR1	P16066	1061 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	TAOK3	Q9H2K8	898 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	PNN	Q9H307	717 aa	Known RBP	10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	ERVV-1	B6SEH8	477 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	NFE2L2	Q16236	605 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	SNED1	Q8TER0	1413 aa		10.8	□□□□□ -0.68
TGIF1-223	ENST00000618001	ERBB4	Q15303	1308 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	NEFM	P07197	916 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	DPY19L2	Q6NUT2	758 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	TPTE2	Q6XPS3	522 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	PIP4K2A	P48426	406 aa	Predicted RBP	10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	EIF4A1	P60842	406 aa	Known RBP	10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	ERFE	Q4G0M1	354 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	CCDC24	Q8N4L8	307 aa		10.79	□□□□□ -0.68
TGIF1-223	ENST00000618001	SCN4A	P35499	1836 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	CCDC93	Q567U6	631 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	NUP98	P52948	1817 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	NPHP1	O15259	732 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	CRY2	Q49AN0	593 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	BABAM1	Q9NWV8	329 aa		10.78	□□□□□ -0.68
TGIF1-223	ENST00000618001	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.77	□□□□□ -0.68
TGIF1-223	ENST00000618001	PODXL2	Q9NZ53	605 aa		10.77	□□□□□ -0.68
TGIF1-223	ENST00000618001	RBM19	Q9Y4C8	960 aa	Known RBP	10.77	□□□□□ -0.68
TGIF1-223	ENST00000618001	MAP3K15	Q6ZN16	1313 aa		10.77	□□□□□ -0.68
TGIF1-223	ENST00000618001	ADAMTSL1	Q8N6G6	1762 aa		10.77	□□□□□ -0.69
TGIF1-223	ENST00000618001	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
TGIF1-223	ENST00000618001	NYX	Q9GZU5	481 aa		10.77	□□□□□ -0.69
TGIF1-223	ENST00000618001	DEK	P35659	375 aa	Known RBP	10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	HLF	Q16534	295 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	RALBP1	Q15311	655 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	RTKN2	Q8IZC4	609 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	ALDH1B1	P30837	517 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	MIS18A	Q9NYP9	233 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	ABCC12	Q96J65	1359 aa		10.76	□□□□□ -0.69
TGIF1-223	ENST00000618001	MAPK8IP3	Q9UPT6	1336 aa		10.75	□□□□□ -0.69
TGIF1-223	ENST00000618001	GRIPAP1	Q4V328	841 aa		10.75	□□□□□ -0.69
TGIF1-223	ENST00000618001	LRP10	Q7Z4F1	713 aa		10.75	□□□□□ -0.69
TGIF1-223	ENST00000618001	HOXA10	P31260	410 aa	Predicted RBP	10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	HTRA3	P83110	453 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	KIF6	Q6ZMV9	814 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	PSMD1	Q99460	953 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	IQCA1L	A6NCM1	817 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	NEFL	P07196	543 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	CC2D2B	Q6DHV5	1058 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	CHADL	Q6NUI6	762 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	SALL2	Q9Y467	1007 aa	Predicted RBP	10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	ANKRD36C	Q5JPF3	1778 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	RNF123	Q5XPI4	1314 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	UBN2	Q6ZU65	1347 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	ZNF34	Q8IZ26	560 aa		10.74	□□□□□ -0.69
TGIF1-223	ENST00000618001	DDN	O94850	711 aa	Predicted RBP	10.73	□□□□□ -0.69
TGIF1-223	ENST00000618001	LMOD3	Q0VAK6	560 aa		10.73	□□□□□ -0.69

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