RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.33
POLR2A-209ENST00000617998 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.34
POLR2A-209ENST00000617998 IQCA1Q86XH1 822 aa12.96□□□□□ -0.34
POLR2A-209ENST00000617998 TTLL6Q8N841 843 aa12.96□□□□□ -0.34
POLR2A-209ENST00000617998 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.34
POLR2A-209ENST00000617998 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.34
POLR2A-209ENST00000617998 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.34
POLR2A-209ENST00000617998 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.34
POLR2A-209ENST00000617998 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
POLR2A-209ENST00000617998 SPOUT1Q5T280 376 aaKnown RBP12.95□□□□□ -0.34
POLR2A-209ENST00000617998 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
POLR2A-209ENST00000617998 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
POLR2A-209ENST00000617998 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
POLR2A-209ENST00000617998 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
POLR2A-209ENST00000617998 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
POLR2A-209ENST00000617998 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 NEBLO76041 1014 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 TPM3P06753 285 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 LDHBP07195 334 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 TPM1P09493 284 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 TRMT1LQ7Z2T5 733 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 TAF12Q16514 161 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 NLRP1Q9C000 1473 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
POLR2A-209ENST00000617998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 NCBP1Q09161 790 aaKnown RBP12.94□□□□□ -0.34
POLR2A-209ENST00000617998 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 FBLN1P23142 703 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 INTS3Q68E01 1043 aaKnown RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
POLR2A-209ENST00000617998 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 MMP10P09238 476 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 LIG1P18858 919 aa12.93□□□□□ -0.34
POLR2A-209ENST00000617998 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 ANXA1P04083 346 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 DESP17661 470 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 SIK1P57059 783 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
POLR2A-209ENST00000617998 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
POLR2A-209ENST00000617998 SYCP1Q15431 976 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
POLR2A-209ENST00000617998 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
POLR2A-209ENST00000617998 DNAJC10Q8IXB1 793 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 PLEKHG1Q9ULL1 1385 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
POLR2A-209ENST00000617998 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 ABCC1P33527 1531 aa12.91□□□□□ -0.34
POLR2A-209ENST00000617998 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
POLR2A-209ENST00000617998 OFD1O75665 1012 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 SLC10A4Q96EP9 437 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 SERPINB2P05120 415 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 CYP7A1P22680 504 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 NOL7Q9UMY1 257 aaKnown RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
POLR2A-209ENST00000617998 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
POLR2A-209ENST00000617998 BCAR3O75815 825 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 FMNL1O95466 1100 aaPredicted RBP12.89□□□□□ -0.35
POLR2A-209ENST00000617998 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 HOXD10P28358 340 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
POLR2A-209ENST00000617998 PI4KAP2A4QPH2 592 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 LRSAM1Q6UWE0 723 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 PI4KAP1Q8N8J0 262 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 NSD2O96028 1365 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms