RNA–Protein interactions for RNA: ENST00000616888.1

Metazoa_SRP.60-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.60-201ENST00000616888 INTS3Q68E01 1043 aaKnown RBP11.94□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 HSP90AB1P08238 724 aaKnown RBP11.93□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 GNAI3P08754 354 aa11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 HOXB7P09629 217 aa11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 FLIIQ13045 1269 aa11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 CHD1LQ86WJ1 897 aa11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 IFNL2Q8IZJ0 200 aa11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 TTC5Q8N0Z6 440 aa11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 GNAI2P04899 355 aa11.9□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 NUCB1Q02818 461 aa11.9□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 LNPKQ9C0E8 428 aa11.9□□□□□ -0.5
Metazoa_SRP.60-201ENST00000616888 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 STRCP1A6NGW2 1772 aa11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 PXDNQ92626 1479 aa11.89□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 F6X3S4 739 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CABP4P57796 275 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 G2E3Q7L622 706 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 STRN4Q9NRL3 753 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CPDO75976 1380 aa11.88□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 BECN1Q14457 450 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 DCAF5Q96JK2 942 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ABCC6O95255 1503 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 APBB1O00213 710 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 PHKG2P15735 406 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 MEIS3Q99687 375 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CHPF2Q9P2E5 772 aa11.86□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 E2F4Q16254 413 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 PLEKHG2Q9H7P9 1386 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 PCDH11XQ9BZA7 1347 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 PCDH11YQ9BZA8 1340 aa11.84□□□□□ -0.51
Metazoa_SRP.60-201ENST00000616888 KCNQ3O43525 872 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 IL2RBP14784 551 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 PTPN5P54829 565 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 FAM208AQ9UK61 1670 aaKnown RBP11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 RGS12O14924 1447 aa11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 CARD10Q9BWT7 1032 aa11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 RGPD2P0DJD1 1756 aa11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
Metazoa_SRP.60-201ENST00000616888 PI4KAP2A4QPH2 592 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms