RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 FAM193AP78312 1265 aa20.54■□□□□ 0.88
ATXN2-227ENST00000616825 WDR78Q5VTH9 848 aa20.54■□□□□ 0.88
ATXN2-227ENST00000616825 CCDC102AQ96A19 550 aa20.54■□□□□ 0.88
ATXN2-227ENST00000616825 DDX46Q7L014 1031 aaKnown RBP20.53■□□□□ 0.88
ATXN2-227ENST00000616825 SCLT1Q96NL6 688 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 CRACR2AQ9BSW2 395 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 IL16Q14005 1332 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
ATXN2-227ENST00000616825 TBC1D2Q9BYX2 928 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 TFIP11Q9UBB9 837 aaKnown RBP20.53■□□□□ 0.88
ATXN2-227ENST00000616825 ACEP12821 1306 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 FSIP1Q8NA03 581 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 KIF18AQ8NI77 898 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 DNAI2Q9GZS0 605 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 ORC3Q9UBD5 711 aaPredicted RBP20.53■□□□□ 0.88
ATXN2-227ENST00000616825 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 MBIPQ9NS73 344 aa20.53■□□□□ 0.88
ATXN2-227ENST00000616825 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
ATXN2-227ENST00000616825 KIF4BQ2VIQ3 1234 aa20.52■□□□□ 0.88
ATXN2-227ENST00000616825 KIF5CO60282 957 aa20.52■□□□□ 0.87
ATXN2-227ENST00000616825 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.87
ATXN2-227ENST00000616825 SSFA2P28290 1259 aa20.52■□□□□ 0.87
ATXN2-227ENST00000616825 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.87
ATXN2-227ENST00000616825 SKAP1Q86WV1 359 aa20.52■□□□□ 0.87
ATXN2-227ENST00000616825 PDE4BQ07343 736 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 CKAP2LQ8IYA6 745 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 PDCL2Q8N4E4 241 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 TSPY2A6NKD2 308 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 IDEP14735 1019 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 UBA7P41226 1012 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 ANKRD24Q8TF21 1146 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 SCAF11Q99590 1463 aaKnown RBP20.51■□□□□ 0.87
ATXN2-227ENST00000616825 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 TAF3Q5VWG9 929 aa20.51■□□□□ 0.87
ATXN2-227ENST00000616825 ABCA10Q8WWZ4 1543 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 FEZ1Q99689 392 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 ANXA1P04083 346 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
ATXN2-227ENST00000616825 MICU3Q86XE3 530 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 NOS1P29475 1434 aa20.5■□□□□ 0.87
ATXN2-227ENST00000616825 STX6O43752 255 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 GBP2P32456 591 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 TMCO3Q6UWJ1 677 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 URI1O94763 535 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 CETN1Q12798 172 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 ARHGAP45Q92619 1136 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 EHMT1Q9H9B1 1298 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 LARP6Q9BRS8 491 aaKnown RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 PAFAH1B1P43034 410 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 HAND2P61296 217 aa20.49■□□□□ 0.87
ATXN2-227ENST00000616825 ZNF219Q9P2Y4 722 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 DHX29Q7Z478 1369 aaKnown RBP20.49■□□□□ 0.87
ATXN2-227ENST00000616825 USO1O60763 962 aaKnown RBP20.48■□□□□ 0.87
ATXN2-227ENST00000616825 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
ATXN2-227ENST00000616825 NCOA7Q8NI08 942 aa20.48■□□□□ 0.87
ATXN2-227ENST00000616825 RHPN1Q8TCX5 695 aa20.48■□□□□ 0.87
ATXN2-227ENST00000616825 TNPO1Q92973 898 aaKnown RBP20.48■□□□□ 0.87
ATXN2-227ENST00000616825 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
ATXN2-227ENST00000616825 AMPD3Q01432 767 aa20.48■□□□□ 0.87
ATXN2-227ENST00000616825 CABP5Q9NP86 173 aa20.48■□□□□ 0.87
ATXN2-227ENST00000616825 CALML4Q96GE6 196 aa20.47■□□□□ 0.87
ATXN2-227ENST00000616825 CLIP2Q9UDT6 1046 aa20.47■□□□□ 0.87
ATXN2-227ENST00000616825 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
ATXN2-227ENST00000616825 YEATS4O95619 227 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 LUZP1Q86V48 1076 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 GDPD2Q9HCC8 539 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 HLA-DOAP06340 250 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 GJB2P29033 226 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 MTIF2P46199 727 aaKnown RBP20.46■□□□□ 0.87
ATXN2-227ENST00000616825 KAT14Q9H8E8 782 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 USP25Q9UHP3 1055 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 TTLL12Q14166 644 aaPredicted RBP20.46■□□□□ 0.87
ATXN2-227ENST00000616825 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
ATXN2-227ENST00000616825 VAT1LQ9HCJ6 419 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
ATXN2-227ENST00000616825 NEMFO60524 1076 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
ATXN2-227ENST00000616825 ZNF165P49910 485 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
ATXN2-227ENST00000616825 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 DENND4BO75064 1496 aaPredicted RBP20.45■□□□□ 0.86
ATXN2-227ENST00000616825 ANKRD36BQ8N2N9 1353 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 CAVIN2O95810 425 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
ATXN2-227ENST00000616825 STX8Q9UNK0 236 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 CCDC102BQ68D86 513 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 PANK2Q9BZ23 570 aa20.45■□□□□ 0.86
ATXN2-227ENST00000616825 BIN1O00499 593 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms