RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	DDX58	O95786	925 aa	Known RBP	29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	ADRA2B	P18089	450 aa		29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	SSFA2	P28290	1259 aa		29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	KSR2	Q6VAB6	950 aa		29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	ANKRD13D	Q6ZTN6	518 aa		29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	PI4KAP1	Q8N8J0	262 aa		29.29	■■■□□ 2.28
ACACA-238	ENST00000616352	NPM2	Q86SE8	214 aa	Known RBP	29.28	■■■□□ 2.28
ACACA-238	ENST00000616352	DZIP3	Q86Y13	1208 aa	Known RBP	29.28	■■■□□ 2.28
ACACA-238	ENST00000616352	PLBD2	Q8NHP8	589 aa		29.28	■■■□□ 2.28
ACACA-238	ENST00000616352		A0A087WZG4	1122 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	PXDNL	A1KZ92	1463 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	ABCC4	O15439	1325 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	MAP3K15	Q6ZN16	1313 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.27	■■■□□ 2.28
ACACA-238	ENST00000616352		F6X3S4	739 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	KIF6	Q6ZMV9	814 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	ARHGEF1	Q92888	912 aa	Known RBP	29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	TBC1D2B	Q9UPU7	963 aa		29.27	■■■□□ 2.28
ACACA-238	ENST00000616352	SLC15A2	Q16348	729 aa		29.26	■■■□□ 2.27
ACACA-238	ENST00000616352	TFCP2L1	Q9NZI6	479 aa		29.26	■■■□□ 2.27
ACACA-238	ENST00000616352	MAP3K2	Q9Y2U5	619 aa		29.26	■■■□□ 2.27
ACACA-238	ENST00000616352	TRAPPC3L	Q5T215	181 aa		29.25	■■■□□ 2.27
ACACA-238	ENST00000616352	ERVV-1	B6SEH8	477 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	PHF14	O94880	888 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	CAMTA2	O94983	1202 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	RLBP1	P12271	317 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	PDE3A	Q14432	1141 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	C20orf194	Q5TEA3	1177 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	RIC3	Q7Z5B4	369 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	DNAAF4	Q8WXU2	420 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	ZBTB3	Q9H5J0	574 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	STK32B	Q9NY57	414 aa		29.24	■■■□□ 2.27
ACACA-238	ENST00000616352	DZIP1L	Q8IYY4	767 aa	Known RBP	29.23	■■■□□ 2.27
ACACA-238	ENST00000616352	CLUAP1	Q96AJ1	413 aa		29.23	■■■□□ 2.27
ACACA-238	ENST00000616352	ARX	Q96QS3	562 aa		29.23	■■■□□ 2.27
ACACA-238	ENST00000616352	NARF	Q9UHQ1	456 aa		29.23	■■■□□ 2.27
ACACA-238	ENST00000616352	ATP10D	Q9P241	1426 aa		29.22	■■■□□ 2.27
ACACA-238	ENST00000616352	MS4A1	P11836	297 aa		29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	HLF	Q16534	295 aa		29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	PNPLA7	Q6ZV29	1317 aa		29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	FTSJ3	Q8IY81	847 aa	Known RBP	29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	PANK1	Q8TE04	598 aa		29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	METTL22	Q9BUU2	404 aa	Predicted RBP	29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	USP42	Q9H9J4	1324 aa	Known RBP	29.21	■■■□□ 2.27
ACACA-238	ENST00000616352	RGL2	O15211	777 aa		29.2	■■■□□ 2.27
ACACA-238	ENST00000616352	GIGYF2	Q6Y7W6	1299 aa	Known RBP	29.2	■■■□□ 2.27
ACACA-238	ENST00000616352	RFC4	P35249	363 aa		29.2	■■■□□ 2.26
ACACA-238	ENST00000616352	FLAD1	Q8NFF5	587 aa		29.2	■■■□□ 2.26
ACACA-238	ENST00000616352	SLC4A10	Q6U841	1118 aa		29.19	■■■□□ 2.26
ACACA-238	ENST00000616352	SRP68	Q9UHB9	627 aa	Known RBP	29.19	■■■□□ 2.26
ACACA-238	ENST00000616352	COL23A1	Q86Y22	540 aa	Predicted RBP	29.18	■■■□□ 2.26
ACACA-238	ENST00000616352	TMEM57	Q8N5G2	664 aa		29.18	■■■□□ 2.26
ACACA-238	ENST00000616352	BCL2L12	Q9HB09	334 aa		29.18	■■■□□ 2.26
ACACA-238	ENST00000616352	BEND3	Q5T5X7	828 aa		29.17	■■■□□ 2.26
ACACA-238	ENST00000616352	USPL1	Q5W0Q7	1092 aa		29.17	■■■□□ 2.26
ACACA-238	ENST00000616352	INTS3	Q68E01	1043 aa	Known RBP	29.17	■■■□□ 2.26
ACACA-238	ENST00000616352	ZPR1	O75312	459 aa		29.16	■■■□□ 2.26
ACACA-238	ENST00000616352	CLEC4G	Q6UXB4	293 aa		29.16	■■■□□ 2.26
ACACA-238	ENST00000616352	COL24A1	Q17RW2	1714 aa		29.16	■■■□□ 2.26
ACACA-238	ENST00000616352	TCIRG1	Q13488	830 aa		29.16	■■■□□ 2.26
ACACA-238	ENST00000616352	CASZ1	Q86V15	1759 aa		29.15	■■■□□ 2.26
ACACA-238	ENST00000616352	IGKV5-2	P06315	115 aa		29.15	■■■□□ 2.26
ACACA-238	ENST00000616352	CCT4	P50991	539 aa	Known RBP	29.15	■■■□□ 2.26
ACACA-238	ENST00000616352	LINS1	Q8NG48	757 aa		29.15	■■■□□ 2.26
ACACA-238	ENST00000616352	MYD88	Q99836	296 aa		29.15	■■■□□ 2.26
ACACA-238	ENST00000616352	NEXN	Q0ZGT2	675 aa		29.14	■■■□□ 2.26
ACACA-238	ENST00000616352	HSP90AB3P	Q58FF7	597 aa		29.14	■■■□□ 2.26
ACACA-238	ENST00000616352	ZNF652	Q9Y2D9	606 aa		29.14	■■■□□ 2.26
ACACA-238	ENST00000616352	ISCA1	Q9BUE6	129 aa		29.13	■■■□□ 2.25
ACACA-238	ENST00000616352	IBTK	Q9P2D0	1353 aa	Predicted RBP	29.13	■■■□□ 2.25
ACACA-238	ENST00000616352	SRCIN1	Q9C0H9	1055 aa		29.12	■■■□□ 2.25
ACACA-238	ENST00000616352	GYS1	P13807	737 aa		29.12	■■■□□ 2.25
ACACA-238	ENST00000616352	MVP	Q14764	893 aa	Known RBP	29.12	■■■□□ 2.25
ACACA-238	ENST00000616352	CWF19L2	Q2TBE0	894 aa	Known RBP	29.12	■■■□□ 2.25
ACACA-238	ENST00000616352	COG6	Q9Y2V7	657 aa		29.12	■■■□□ 2.25
ACACA-238	ENST00000616352	NEURL1B	A8MQ27	555 aa		29.11	■■■□□ 2.25
ACACA-238	ENST00000616352	ATP5J2-PTCD1	G3V325	749 aa		29.11	■■■□□ 2.25
ACACA-238	ENST00000616352	TRIM28	Q13263	835 aa	Known RBP	29.11	■■■□□ 2.25
ACACA-238	ENST00000616352	ZNF34	Q8IZ26	560 aa		29.11	■■■□□ 2.25
ACACA-238	ENST00000616352	ALDH1L1	O75891	902 aa		29.1	■■■□□ 2.25
ACACA-238	ENST00000616352	ITPRIP	Q8IWB1	547 aa		29.1	■■■□□ 2.25
ACACA-238	ENST00000616352	IRX6	P78412	446 aa	Predicted RBP	29.09	■■■□□ 2.25
ACACA-238	ENST00000616352	FKBP8	Q14318	412 aa		29.09	■■■□□ 2.25
ACACA-238	ENST00000616352	UBN2	Q6ZU65	1347 aa		29.08	■■■□□ 2.25
ACACA-238	ENST00000616352	CRBN	Q96SW2	442 aa		29.08	■■■□□ 2.25
ACACA-238	ENST00000616352	MSH5	O43196	834 aa		29.07	■■■□□ 2.24
ACACA-238	ENST00000616352	TBC1D9B	Q66K14	1250 aa		29.07	■■■□□ 2.24
ACACA-238	ENST00000616352	CCDC191	Q8NCU4	936 aa		29.07	■■■□□ 2.24
ACACA-238	ENST00000616352	GPT	P24298	496 aa		29.06	■■■□□ 2.24
ACACA-238	ENST00000616352	NLRP10	Q86W26	655 aa		29.06	■■■□□ 2.24
ACACA-238	ENST00000616352	PDGFD	Q9GZP0	370 aa	Predicted RBP	29.06	■■■□□ 2.24
ACACA-238	ENST00000616352	GCKR	Q14397	625 aa		29.05	■■■□□ 2.24
ACACA-238	ENST00000616352	DDX19B	Q9UMR2	479 aa		29.05	■■■□□ 2.24
ACACA-238	ENST00000616352	NIP7	Q9Y221	180 aa	Known RBP eCLIP	29.05	■■■□□ 2.24
ACACA-238	ENST00000616352	CWC25	Q9NXE8	425 aa	Predicted RBP	29.05	■■■□□ 2.24
ACACA-238	ENST00000616352	USP44	Q9H0E7	712 aa		29.04	■■■□□ 2.24
ACACA-238	ENST00000616352	ZBTB7B	O15156	539 aa	Predicted RBP	29.03	■■■□□ 2.24
ACACA-238	ENST00000616352	MYH3	P11055	1940 aa		29.03	■■■□□ 2.24
ACACA-238	ENST00000616352	LAMB2	P55268	1798 aa		29.03	■■■□□ 2.24
ACACA-238	ENST00000616352	NFIX	Q14938	502 aa		29.02	■■■□□ 2.24

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