RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 PLBD2Q8NHP8 589 aa29.55■■■□□ 2.32
CCND3-223ENST00000616010 C1orf115Q9H7X2 142 aa29.55■■■□□ 2.32
CCND3-223ENST00000616010 INTS5Q6P9B9 1019 aaKnown RBP29.54■■■□□ 2.32
CCND3-223ENST00000616010 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
CCND3-223ENST00000616010 IL6STP40189 918 aaPredicted RBP29.52■■■□□ 2.32
CCND3-223ENST00000616010 METTL22Q9BUU2 404 aaPredicted RBP29.52■■■□□ 2.32
CCND3-223ENST00000616010 ZBTB3Q9H5J0 574 aa29.52■■■□□ 2.32
CCND3-223ENST00000616010 NEXNQ0ZGT2 675 aa29.51■■■□□ 2.31
CCND3-223ENST00000616010 CWF19L2Q2TBE0 894 aaKnown RBP29.5■■■□□ 2.31
CCND3-223ENST00000616010 KIF6Q6ZMV9 814 aa29.5■■■□□ 2.31
CCND3-223ENST00000616010 LINS1Q8NG48 757 aa29.5■■■□□ 2.31
CCND3-223ENST00000616010 MYD88Q99836 296 aa29.5■■■□□ 2.31
CCND3-223ENST00000616010 AFDNP55196 1824 aaKnown RBP29.5■■■□□ 2.31
CCND3-223ENST00000616010 NPM2Q86SE8 214 aaKnown RBP29.49■■■□□ 2.31
CCND3-223ENST00000616010 ARXQ96QS3 562 aa29.49■■■□□ 2.31
CCND3-223ENST00000616010 ALDH1L1O75891 902 aa29.49■■■□□ 2.31
CCND3-223ENST00000616010 CNTNAP4Q9C0A0 1308 aa29.48■■■□□ 2.31
CCND3-223ENST00000616010 USP44Q9H0E7 712 aa29.48■■■□□ 2.31
CCND3-223ENST00000616010 IGKV5-2P06315 115 aa29.47■■■□□ 2.31
CCND3-223ENST00000616010 KDM2BQ8NHM5 1336 aa29.47■■■□□ 2.31
CCND3-223ENST00000616010 TNS1Q9HBL0 1735 aaKnown RBP29.47■■■□□ 2.31
CCND3-223ENST00000616010 GNAI3P08754 354 aa29.47■■■□□ 2.31
CCND3-223ENST00000616010 EIF5P55010 431 aaKnown RBP29.47■■■□□ 2.31
CCND3-223ENST00000616010 IGHDP01880 384 aa29.46■■■□□ 2.31
CCND3-223ENST00000616010 C4BP0C0L5 1744 aa29.45■■■□□ 2.31
CCND3-223ENST00000616010 MAP3K15Q6ZN16 1313 aa29.45■■■□□ 2.31
CCND3-223ENST00000616010 NEURL1BA8MQ27 555 aa29.45■■■□□ 2.3
CCND3-223ENST00000616010 UBTFL1P0CB47 393 aaPredicted RBP29.44■■■□□ 2.3
CCND3-223ENST00000616010 DZIP3Q86Y13 1208 aaKnown RBP29.44■■■□□ 2.3
CCND3-223ENST00000616010 COL15A1P39059 1388 aa29.44■■■□□ 2.3
CCND3-223ENST00000616010 CENPQQ7L2Z9 268 aaPredicted RBP29.44■■■□□ 2.3
CCND3-223ENST00000616010 LRRC4BQ9NT99 713 aa29.44■■■□□ 2.3
CCND3-223ENST00000616010 ATP5J2-PTCD1G3V325 749 aa29.43■■■□□ 2.3
CCND3-223ENST00000616010 TBC1D2BQ9UPU7 963 aa29.43■■■□□ 2.3
CCND3-223ENST00000616010 GNAI2P04899 355 aa29.42■■■□□ 2.3
CCND3-223ENST00000616010 NBPF7P0C2Y1 421 aaPredicted RBP29.42■■■□□ 2.3
CCND3-223ENST00000616010 C9orf78Q9NZ63 289 aaPredicted RBP29.42■■■□□ 2.3
CCND3-223ENST00000616010 RWDD1Q9H446 243 aaPredicted RBP29.42■■■□□ 2.3
CCND3-223ENST00000616010 APBA3O96018 575 aa29.41■■■□□ 2.3
CCND3-223ENST00000616010 SLC27A3Q5K4L6 730 aa29.41■■■□□ 2.3
CCND3-223ENST00000616010 RC3H1Q5TC82 1133 aaKnown RBP29.41■■■□□ 2.3
CCND3-223ENST00000616010 IBTKQ9P2D0 1353 aaPredicted RBP29.4■■■□□ 2.3
CCND3-223ENST00000616010 ANKRD36CQ5JPF3 1778 aa29.4■■■□□ 2.3
CCND3-223ENST00000616010 GRM8O00222 908 aa29.4■■■□□ 2.3
CCND3-223ENST00000616010 HDAC1Q13547 482 aaPredicted RBP29.4■■■□□ 2.3
CCND3-223ENST00000616010 GCKRQ14397 625 aa29.4■■■□□ 2.3
CCND3-223ENST00000616010 LRRFIP2Q9Y608 721 aaKnown RBP29.4■■■□□ 2.3
CCND3-223ENST00000616010 NUP98P52948 1817 aa29.39■■■□□ 2.3
CCND3-223ENST00000616010 GNPATO15228 680 aa29.39■■■□□ 2.3
CCND3-223ENST00000616010 HLFQ16534 295 aa29.38■■■□□ 2.29
CCND3-223ENST00000616010 CEP85Q6P2H3 762 aa29.38■■■□□ 2.29
CCND3-223ENST00000616010 GIGYF2Q6Y7W6 1299 aaKnown RBP29.38■■■□□ 2.29
CCND3-223ENST00000616010 SIRT2Q8IXJ6 389 aa29.38■■■□□ 2.29
CCND3-223ENST00000616010 BCORQ6W2J9 1755 aa29.37■■■□□ 2.29
CCND3-223ENST00000616010 TCIRG1Q13488 830 aa29.37■■■□□ 2.29
CCND3-223ENST00000616010 TXNRD1Q16881 649 aa29.37■■■□□ 2.29
CCND3-223ENST00000616010 ERVV-1B6SEH8 477 aa29.37■■■□□ 2.29
CCND3-223ENST00000616010 PLSCR1O15162 318 aa29.36■■■□□ 2.29
CCND3-223ENST00000616010 ANKRD44Q8N8A2 993 aa29.36■■■□□ 2.29
CCND3-223ENST00000616010 UTYO14607 1347 aa29.35■■■□□ 2.29
CCND3-223ENST00000616010 RPS6KA4O75676 772 aa29.35■■■□□ 2.29
CCND3-223ENST00000616010 RPAP2Q8IXW5 612 aaPredicted RBP29.35■■■□□ 2.29
CCND3-223ENST00000616010 RGPD3A6NKT7 1758 aaPredicted RBP29.35■■■□□ 2.29
CCND3-223ENST00000616010 RGPD4Q7Z3J3 1758 aa29.35■■■□□ 2.29
CCND3-223ENST00000616010 AK7Q96M32 723 aa29.35■■■□□ 2.29
CCND3-223ENST00000616010 CWC25Q9NXE8 425 aaPredicted RBP29.35■■■□□ 2.29
CCND3-223ENST00000616010 A0A087WZG4 1122 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 HSP90AB3PQ58FF7 597 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 SMIM5Q71RC9 77 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 PROM2Q8N271 834 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 ISCA1Q9BUE6 129 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 RTCBQ9Y3I0 505 aaKnown RBP29.34■■■□□ 2.29
CCND3-223ENST00000616010 SCN7AQ01118 1682 aa29.34■■■□□ 2.29
CCND3-223ENST00000616010 CAMTA2O94983 1202 aa29.33■■■□□ 2.29
CCND3-223ENST00000616010 CCDC191Q8NCU4 936 aa29.33■■■□□ 2.29
CCND3-223ENST00000616010 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
CCND3-223ENST00000616010 UBR3Q6ZT12 1888 aa29.32■■■□□ 2.28
CCND3-223ENST00000616010 C4AP0C0L4 1744 aa29.31■■■□□ 2.28
CCND3-223ENST00000616010 GPTP24298 496 aa29.31■■■□□ 2.28
CCND3-223ENST00000616010 UBE3BQ7Z3V4 1068 aa29.31■■■□□ 2.28
CCND3-223ENST00000616010 JARID2Q92833 1246 aaPredicted RBP29.3■■■□□ 2.28
CCND3-223ENST00000616010 SUCLG2Q96I99 432 aa29.3■■■□□ 2.28
CCND3-223ENST00000616010 HDAC5Q9UQL6 1122 aa29.3■■■□□ 2.28
CCND3-223ENST00000616010 TRIM28Q13263 835 aaKnown RBP29.29■■■□□ 2.28
CCND3-223ENST00000616010 PHF14O94880 888 aa29.28■■■□□ 2.28
CCND3-223ENST00000616010 HMMRO75330 724 aa29.28■■■□□ 2.28
CCND3-223ENST00000616010 PNMA6EA0A0J9YXQ4 647 aa29.27■■■□□ 2.28
CCND3-223ENST00000616010 RTL5Q5HYW3 569 aaPredicted RBP29.27■■■□□ 2.28
CCND3-223ENST00000616010 NLRP10Q86W26 655 aa29.27■■■□□ 2.28
CCND3-223ENST00000616010 ZNF652Q9Y2D9 606 aa29.27■■■□□ 2.28
CCND3-223ENST00000616010 CASP7P55210 303 aa29.26■■■□□ 2.27
CCND3-223ENST00000616010 ATP8B2P98198 1209 aa29.26■■■□□ 2.27
CCND3-223ENST00000616010 SMC5Q8IY18 1101 aa29.26■■■□□ 2.27
CCND3-223ENST00000616010 KAZALD1Q96I82 304 aa29.26■■■□□ 2.27
CCND3-223ENST00000616010 UBN2Q6ZU65 1347 aa29.26■■■□□ 2.27
CCND3-223ENST00000616010 H7C1W4 665 aa29.25■■■□□ 2.27
CCND3-223ENST00000616010 ZNF34Q8IZ26 560 aa29.25■■■□□ 2.27
CCND3-223ENST00000616010 BICC1Q9H694 974 aaKnown RBP29.25■■■□□ 2.27
CCND3-223ENST00000616010 HMGB2P26583 209 aaKnown RBP29.25■■■□□ 2.27
CCND3-223ENST00000616010 ARHGEF1Q92888 912 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms