RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 IGHDP01880 384 aa13.94□□□□□ -0.18
RABGAP1-213ENST00000616002 CRKLP46109 303 aaKnown RBP13.94□□□□□ -0.18
RABGAP1-213ENST00000616002 SLC4A3P48751 1232 aa13.94□□□□□ -0.18
RABGAP1-213ENST00000616002 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
RABGAP1-213ENST00000616002 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
RABGAP1-213ENST00000616002 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 KCNA3P22001 575 aa13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 RGS3P49796 1198 aa13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 ARID3AQ99856 593 aa13.93□□□□□ -0.18
RABGAP1-213ENST00000616002 ARFGEF1Q9Y6D6 1849 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 BCAR3O75815 825 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 TBC1D32Q96NH3 1257 aa13.92□□□□□ -0.18
RABGAP1-213ENST00000616002 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
RABGAP1-213ENST00000616002 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
RABGAP1-213ENST00000616002 RNF181Q9P0P0 153 aa13.91□□□□□ -0.18
RABGAP1-213ENST00000616002 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
RABGAP1-213ENST00000616002 DDR1Q08345 913 aa13.9□□□□□ -0.18
RABGAP1-213ENST00000616002 FSTL1Q12841 308 aa13.9□□□□□ -0.18
RABGAP1-213ENST00000616002 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
RABGAP1-213ENST00000616002 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 ZPR1O75312 459 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 CHRNA5P30532 468 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 SULT6B1Q6IMI4 303 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
RABGAP1-213ENST00000616002 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 TJP1Q07157 1748 aa13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 INTS5Q6P9B9 1019 aaKnown RBP13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
RABGAP1-213ENST00000616002 TM4SF1P30408 202 aa13.87□□□□□ -0.19
RABGAP1-213ENST00000616002 HTRA3P83110 453 aa13.87□□□□□ -0.19
RABGAP1-213ENST00000616002 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
RABGAP1-213ENST00000616002 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
RABGAP1-213ENST00000616002 MYH16Q9H6N6 1097 aa13.86□□□□□ -0.19
RABGAP1-213ENST00000616002 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
RABGAP1-213ENST00000616002 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 SLC52A2Q9HAB3 445 aa13.85□□□□□ -0.19
RABGAP1-213ENST00000616002 SBF1O95248 1867 aa13.84□□□□□ -0.19
RABGAP1-213ENST00000616002 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
RABGAP1-213ENST00000616002 COG6Q9Y2V7 657 aa13.84□□□□□ -0.19
RABGAP1-213ENST00000616002 SOS1Q07889 1333 aaPredicted RBP13.84□□□□□ -0.19
RABGAP1-213ENST00000616002 FSD2A1L4K1 749 aa13.83□□□□□ -0.19
RABGAP1-213ENST00000616002 IL13P35225 146 aa13.83□□□□□ -0.19
RABGAP1-213ENST00000616002 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.19
RABGAP1-213ENST00000616002 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.19
RABGAP1-213ENST00000616002 SEC24BO95487 1268 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 RASSF7Q02833 373 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 NFIXQ14938 502 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 PANK1Q8TE04 598 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 LGR6Q9HBX8 967 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 NARFQ9UHQ1 456 aa13.83□□□□□ -0.2
RABGAP1-213ENST00000616002 COL15A1P39059 1388 aa13.82□□□□□ -0.2
RABGAP1-213ENST00000616002 LMNB1P20700 586 aa13.82□□□□□ -0.2
RABGAP1-213ENST00000616002 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
RABGAP1-213ENST00000616002 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
RABGAP1-213ENST00000616002 PDZRN3Q9UPQ7 1066 aa13.82□□□□□ -0.2
RABGAP1-213ENST00000616002 IL16Q14005 1332 aa13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 SERPINB2P05120 415 aa13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 PCDHB15Q9Y5E8 787 aa13.81□□□□□ -0.2
RABGAP1-213ENST00000616002 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
RABGAP1-213ENST00000616002 PTMSP20962 102 aa13.8□□□□□ -0.2
RABGAP1-213ENST00000616002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGAP1-213ENST00000616002 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
RABGAP1-213ENST00000616002 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
RABGAP1-213ENST00000616002 HMOX1P09601 288 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 MRC1P22897 1456 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 H0YIN7 160 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 MCM4P33991 863 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 BCL2L12Q9HB09 334 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 NRXN2Q9P2S2 1712 aa13.79□□□□□ -0.2
RABGAP1-213ENST00000616002 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms