RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	NAT1	P18440	290 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	FLT3	P36888	993 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SF3A1	Q15459	793 aa	Known RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	NUTM2G	Q5VZR2	741 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SENP7	Q9BQF6	1050 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CRYBG1	Q9Y4K1	1723 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940		A6NJR5	290 aa		11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	HMGN5	P82970	282 aa	Known RBP	11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	OGFOD1	Q8N543	542 aa		11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PNISR	Q8TF01	805 aa	Known RBP	11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ANKRD36B	Q8N2N9	1353 aa		11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	NINL	Q9Y2I6	1382 aa		11.67	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TNS3	Q68CZ2	1445 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	POU5F1	Q01860	360 aa	Known RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	HSP90B2P	Q58FF3	399 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	C11orf96	Q7Z7L8	435 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	NUCKS1	Q9H1E3	243 aa	Known RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SPATA31A3	Q5VYP0	1347 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SSH2	Q76I76	1423 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	NAP1L1	P55209	391 aa	Known RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	HDLBP	Q00341	1268 aa	Known RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	FLII	Q13045	1269 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	GJC2	Q5T442	439 aa	Predicted RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	LRRC59	Q96AG4	307 aa	Known RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CARD14	Q9BXL6	1004 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PANK3	Q9H999	370 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ZRANB1	Q9UGI0	708 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SWAP70	Q9UH65	585 aa		11.66	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TTC21B	Q7Z4L5	1316 aa		11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ESPN	B1AK53	854 aa		11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TRIM6-TRIM34	B2RNG4	842 aa		11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TRIM34	Q9BYJ4	488 aa		11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	WWC3	Q9ULE0	1092 aa		11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.65	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SBNO1	A3KN83	1393 aa		11.65	□□□□□ -0.55
LRTOMT-222	ENST00000615940	PNPLA6	Q8IY17	1366 aa		11.65	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NSD3	Q9BZ95	1437 aa		11.65	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CTR9	Q6PD62	1173 aa		11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CABLES1	Q8TDN4	633 aa		11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	AGBL1	Q96MI9	1066 aa		11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	EDC4	Q6P2E9	1401 aa	Known RBP	11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	MED1	Q15648	1581 aa	Predicted RBP	11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	ANKRD26	Q9UPS8	1709 aa		11.64	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CASQ1	P31415	396 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NME9	Q86XW9	330 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	ABTB2	Q8N961	1025 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	MAP2	P11137	1827 aa	Known RBP	11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	RGPD5	Q99666	1765 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	TPM3	P06753	285 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	ABCD1	P33897	745 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	UBXN4	Q92575	508 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	GPATCH3	Q96I76	525 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CFAP53	Q96M91	514 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CGN	Q9P2M7	1197 aa	Known RBP	11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	JCAD	Q9P266	1359 aa		11.63	□□□□□ -0.55
LRTOMT-222	ENST00000615940	VDR	P11473	427 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	CAPN2	P17655	700 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	L1TD1	Q5T7N2	865 aa	Known RBP	11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	JMY	Q8N9B5	988 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	MED4	Q9NPJ6	270 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	SERPINA10	Q9UK55	444 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	FAN1	Q9Y2M0	1017 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	USP54	Q70EL1	1684 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	LTN1	O94822	1766 aa		11.62	□□□□□ -0.55
LRTOMT-222	ENST00000615940	BICDL2	A1A5D9	508 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NUTM2E	B1AL46	878 aa	Predicted RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	DDX10	Q13206	875 aa	Known RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	SWT1	Q5T5J6	900 aa	Known RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	DZIP3	Q86Y13	1208 aa	Known RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	KNSTRN	Q9Y448	316 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	LRP6	O75581	1613 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	NLRP6	P59044	892 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	C11orf91	Q3C1V1	193 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	HS6ST3	Q8IZP7	471 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	TTC30B	Q8N4P2	665 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	ERCC4	Q92889	916 aa	Predicted RBP	11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	C22orf23	Q9BZE7	217 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	BRMS1	Q9HCU9	246 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	SUN2	Q9UH99	717 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	PAXBP1	Q9Y5B6	917 aa		11.61	□□□□□ -0.55
LRTOMT-222	ENST00000615940	ARHGEF10	O15013	1369 aa		11.6	□□□□□ -0.55
LRTOMT-222	ENST00000615940	IPO5	O00410	1097 aa	Known RBP	11.6	□□□□□ -0.55
LRTOMT-222	ENST00000615940	RBM46	Q8TBY0	533 aa	Known RBP	11.6	□□□□□ -0.55
LRTOMT-222	ENST00000615940	GGNBP2	Q9H3C7	697 aa		11.6	□□□□□ -0.55
LRTOMT-222	ENST00000615940	TTC21A	Q8NDW8	1320 aa		11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	FYB1	O15117	783 aa		11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	C1orf131	Q8NDD1	294 aa	Known RBP	11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	BRD4	O60885	1362 aa	Predicted RBP	11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	TULP2	O00295	520 aa		11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	PER1	O15534	1290 aa	Predicted RBP	11.59	□□□□□ -0.55
LRTOMT-222	ENST00000615940	FBLN1	P23142	703 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms