RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
COL4A1-205ENST00000615732 FER1L6Q2WGJ9 1857 aa13.98□□□□□ -0.17
COL4A1-205ENST00000615732 H0YIN7 160 aa13.98□□□□□ -0.17
COL4A1-205ENST00000615732 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-205ENST00000615732 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
COL4A1-205ENST00000615732 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
COL4A1-205ENST00000615732 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
COL4A1-205ENST00000615732 A0A087WZG4 1122 aa13.97□□□□□ -0.17
COL4A1-205ENST00000615732 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
COL4A1-205ENST00000615732 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
COL4A1-205ENST00000615732 POTECB2RU33 542 aa13.97□□□□□ -0.17
COL4A1-205ENST00000615732 DICER1Q9UPY3 1922 aaKnown RBP13.97□□□□□ -0.17
COL4A1-205ENST00000615732 CACNA1SQ13698 1873 aa13.96□□□□□ -0.17
COL4A1-205ENST00000615732 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
COL4A1-205ENST00000615732 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL4A1-205ENST00000615732 PRR5LQ6MZQ0 368 aa13.96□□□□□ -0.17
COL4A1-205ENST00000615732 MCM10Q7L590 875 aa13.96□□□□□ -0.17
COL4A1-205ENST00000615732 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL4A1-205ENST00000615732 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
COL4A1-205ENST00000615732 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
COL4A1-205ENST00000615732 APAF1O14727 1248 aa13.95□□□□□ -0.18
COL4A1-205ENST00000615732 NPHP1O15259 732 aa13.95□□□□□ -0.18
COL4A1-205ENST00000615732 C21orf2O43822 256 aa13.95□□□□□ -0.18
COL4A1-205ENST00000615732 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
COL4A1-205ENST00000615732 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-205ENST00000615732 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
COL4A1-205ENST00000615732 CAPN15O75808 1086 aa13.94□□□□□ -0.18
COL4A1-205ENST00000615732 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
COL4A1-205ENST00000615732 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
COL4A1-205ENST00000615732 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
COL4A1-205ENST00000615732 TNS4Q8IZW8 715 aa13.94□□□□□ -0.18
COL4A1-205ENST00000615732 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
COL4A1-205ENST00000615732 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
COL4A1-205ENST00000615732 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
COL4A1-205ENST00000615732 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
COL4A1-205ENST00000615732 PDE6BP35913 854 aa13.93□□□□□ -0.18
COL4A1-205ENST00000615732 DZIP3Q86Y13 1208 aaKnown RBP13.93□□□□□ -0.18
COL4A1-205ENST00000615732 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
COL4A1-205ENST00000615732 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
COL4A1-205ENST00000615732 LTBP3Q9NS15 1303 aa13.92□□□□□ -0.18
COL4A1-205ENST00000615732 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
COL4A1-205ENST00000615732 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
COL4A1-205ENST00000615732 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
COL4A1-205ENST00000615732 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
COL4A1-205ENST00000615732 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
COL4A1-205ENST00000615732 ST5P78524 1137 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 ERICH6BQ5W0A0 696 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
COL4A1-205ENST00000615732 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
COL4A1-205ENST00000615732 NEFMP07197 916 aa13.9□□□□□ -0.18
COL4A1-205ENST00000615732 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
COL4A1-205ENST00000615732 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
COL4A1-205ENST00000615732 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
COL4A1-205ENST00000615732 FAM177BA6PVY3 158 aa13.89□□□□□ -0.19
COL4A1-205ENST00000615732 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
COL4A1-205ENST00000615732 SRGNP10124 158 aa13.89□□□□□ -0.19
COL4A1-205ENST00000615732 STYK1Q6J9G0 422 aa13.89□□□□□ -0.19
COL4A1-205ENST00000615732 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
COL4A1-205ENST00000615732 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
COL4A1-205ENST00000615732 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
COL4A1-205ENST00000615732 E9PSI1 815 aa13.88□□□□□ -0.19
COL4A1-205ENST00000615732 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
COL4A1-205ENST00000615732 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
COL4A1-205ENST00000615732 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
COL4A1-205ENST00000615732 CNKSR1Q969H4 720 aa13.88□□□□□ -0.19
COL4A1-205ENST00000615732 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
COL4A1-205ENST00000615732 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
COL4A1-205ENST00000615732 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
COL4A1-205ENST00000615732 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
COL4A1-205ENST00000615732 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
COL4A1-205ENST00000615732 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
COL4A1-205ENST00000615732 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
COL4A1-205ENST00000615732 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
COL4A1-205ENST00000615732 NIP7Q9Y221 180 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL4A1-205ENST00000615732 ZNF652Q9Y2D9 606 aa13.86□□□□□ -0.19
COL4A1-205ENST00000615732 RNF123Q5XPI4 1314 aa13.86□□□□□ -0.19
COL4A1-205ENST00000615732 SCN4AP35499 1836 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
COL4A1-205ENST00000615732 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 C7orf43Q8WVR3 580 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 PASKQ96RG2 1323 aa13.85□□□□□ -0.19
COL4A1-205ENST00000615732 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 HLFQ16534 295 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
COL4A1-205ENST00000615732 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
COL4A1-205ENST00000615732 CNTNAP1P78357 1384 aa13.83□□□□□ -0.19
COL4A1-205ENST00000615732 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms