RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
MMP28-205ENST00000615317 DDX60Q8IY21 1712 aaKnown RBP11.62□□□□□ -0.55
MMP28-205ENST00000615317 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
MMP28-205ENST00000615317 PTPRCP08575 1304 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
MMP28-205ENST00000615317 MYH3P11055 1940 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 PLIN1O60240 522 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 TRIM27P14373 513 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 SLC15A2Q16348 729 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 SRP68Q9UHB9 627 aaKnown RBP11.61□□□□□ -0.55
MMP28-205ENST00000615317 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
MMP28-205ENST00000615317 ABCC4O15439 1325 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 F6X3S4 739 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 ADRA2BP18089 450 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
MMP28-205ENST00000615317 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 NRXN2Q9P2S2 1712 aa11.6□□□□□ -0.55
MMP28-205ENST00000615317 A0A087WZG4 1122 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 MSH5O43196 834 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
MMP28-205ENST00000615317 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
MMP28-205ENST00000615317 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
MMP28-205ENST00000615317 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
MMP28-205ENST00000615317 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
MMP28-205ENST00000615317 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
MMP28-205ENST00000615317 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 COL11A2P13942 1736 aaPredicted RBP11.58□□□□□ -0.56
MMP28-205ENST00000615317 ANKRD31Q8N7Z5 1873 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
MMP28-205ENST00000615317 RFC4P35249 363 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
MMP28-205ENST00000615317 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
MMP28-205ENST00000615317 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 MYD88Q99836 296 aa11.58□□□□□ -0.56
MMP28-205ENST00000615317 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
MMP28-205ENST00000615317 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
MMP28-205ENST00000615317 ZPR1O75312 459 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 RLBP1P12271 317 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
MMP28-205ENST00000615317 HLFQ16534 295 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 MSL1Q68DK7 614 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 PANK1Q8TE04 598 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 PDGFDQ9GZP0 370 aaPredicted RBP11.57□□□□□ -0.56
MMP28-205ENST00000615317 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
MMP28-205ENST00000615317 GPTP24298 496 aa11.56□□□□□ -0.56
MMP28-205ENST00000615317 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
MMP28-205ENST00000615317 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
MMP28-205ENST00000615317 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
MMP28-205ENST00000615317 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
MMP28-205ENST00000615317 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
MMP28-205ENST00000615317 ATP5J2-PTCD1G3V325 749 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 SOCS7O14512 581 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 GYS1P13807 737 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
MMP28-205ENST00000615317 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
MMP28-205ENST00000615317 BICDL1Q6ZP65 573 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
MMP28-205ENST00000615317 TMEM57Q8N5G2 664 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
MMP28-205ENST00000615317 METTL22Q9BUU2 404 aaPredicted RBP11.55□□□□□ -0.56
MMP28-205ENST00000615317 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 KIF13BQ9NQT8 1826 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 ERVV-1B6SEH8 477 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 NEXNQ0ZGT2 675 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 FKBP8Q14318 412 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 TBC1D9BQ66K14 1250 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
MMP28-205ENST00000615317 KIAA1551Q9HCM1 1747 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
MMP28-205ENST00000615317 COG6Q9Y2V7 657 aa11.53□□□□□ -0.56
MMP28-205ENST00000615317 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
MMP28-205ENST00000615317 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
MMP28-205ENST00000615317 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
MMP28-205ENST00000615317 MVPQ14764 893 aaKnown RBP11.52□□□□□ -0.57
MMP28-205ENST00000615317 NFIXQ14938 502 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms