RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 SPG7Q9UQ90 795 aa17.92■□□□□ 0.46
POLR2E-213ENST00000615234 STRCQ7RTU9 1775 aa17.91■□□□□ 0.46
POLR2E-213ENST00000615234 PA2G4Q9UQ80 394 aaKnown RBP17.91■□□□□ 0.46
POLR2E-213ENST00000615234 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
POLR2E-213ENST00000615234 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
POLR2E-213ENST00000615234 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
POLR2E-213ENST00000615234 KIAA1211Q6ZU35 1233 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 CAMTA1Q9Y6Y1 1673 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 WDR33Q9C0J8 1336 aaKnown RBP17.9■□□□□ 0.46
POLR2E-213ENST00000615234 AK2P54819 239 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 ECHDC1Q9NTX5 307 aa17.9■□□□□ 0.46
POLR2E-213ENST00000615234 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
POLR2E-213ENST00000615234 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
POLR2E-213ENST00000615234 RUFY3Q7L099 469 aa17.89■□□□□ 0.45
POLR2E-213ENST00000615234 FOXD4L6Q3SYB3 417 aaPredicted RBP17.89■□□□□ 0.45
POLR2E-213ENST00000615234 FOXD4L3Q6VB84 417 aaPredicted RBP17.89■□□□□ 0.45
POLR2E-213ENST00000615234 KAZALD1Q96I82 304 aa17.89■□□□□ 0.45
POLR2E-213ENST00000615234 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.45
POLR2E-213ENST00000615234 HYPKQ9NX55 129 aa17.89■□□□□ 0.45
POLR2E-213ENST00000615234 ERC1Q8IUD2 1116 aa17.88■□□□□ 0.45
POLR2E-213ENST00000615234 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
POLR2E-213ENST00000615234 GDPD2Q9HCC8 539 aa17.88■□□□□ 0.45
POLR2E-213ENST00000615234 ADAMTS7Q9UKP4 1686 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
POLR2E-213ENST00000615234 PTH1RQ03431 593 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
POLR2E-213ENST00000615234 LIMCH1Q9UPQ0 1083 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 HDAC5Q9UQL6 1122 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 GRM8O00222 908 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 IFIT2P09913 472 aaKnown RBP17.87■□□□□ 0.45
POLR2E-213ENST00000615234 RUFY2Q8WXA3 655 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 TRPM3Q9HCF6 1732 aaPredicted RBP17.87■□□□□ 0.45
POLR2E-213ENST00000615234 UTYO14607 1347 aa17.87■□□□□ 0.45
POLR2E-213ENST00000615234 CPA1P15085 419 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 PDIA6Q15084 440 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 USP48Q86UV5 1035 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 DDX21Q9NR30 783 aaKnown RBP eCLIP17.86■□□□□ 0.45
POLR2E-213ENST00000615234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.86■□□□□ 0.45
POLR2E-213ENST00000615234 HS1BP3Q53T59 392 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 AACSQ86V21 672 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 TCHHQ07283 1943 aa17.86■□□□□ 0.45
POLR2E-213ENST00000615234 SASH1O94885 1247 aa17.85■□□□□ 0.45
POLR2E-213ENST00000615234 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
POLR2E-213ENST00000615234 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
POLR2E-213ENST00000615234 RGPD5Q99666 1765 aa17.85■□□□□ 0.45
POLR2E-213ENST00000615234 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
POLR2E-213ENST00000615234 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
POLR2E-213ENST00000615234 KCNB2Q92953 911 aa17.85■□□□□ 0.45
POLR2E-213ENST00000615234 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
POLR2E-213ENST00000615234 ADCK5Q3MIX3 580 aa17.84■□□□□ 0.45
POLR2E-213ENST00000615234 KRT28Q7Z3Y7 464 aa17.84■□□□□ 0.45
POLR2E-213ENST00000615234 LARGE1O95461 756 aa17.84■□□□□ 0.45
POLR2E-213ENST00000615234 DDX58O95786 925 aaKnown RBP17.84■□□□□ 0.45
POLR2E-213ENST00000615234 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
POLR2E-213ENST00000615234 PRPF40BQ6NWY9 871 aaKnown RBP17.84■□□□□ 0.45
POLR2E-213ENST00000615234 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
POLR2E-213ENST00000615234 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
POLR2E-213ENST00000615234 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.84■□□□□ 0.45
POLR2E-213ENST00000615234 ERBB3P21860 1342 aa17.83■□□□□ 0.45
POLR2E-213ENST00000615234 IGKV5-2P06315 115 aa17.83■□□□□ 0.45
POLR2E-213ENST00000615234 SYT1P21579 422 aa17.83■□□□□ 0.45
POLR2E-213ENST00000615234 SYAP1Q96A49 352 aaPredicted RBP17.83■□□□□ 0.45
POLR2E-213ENST00000615234 STX6O43752 255 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 JAKMIP1Q96N16 626 aaKnown RBP17.82■□□□□ 0.44
POLR2E-213ENST00000615234 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 MSNP26038 577 aaKnown RBP17.82■□□□□ 0.44
POLR2E-213ENST00000615234 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
POLR2E-213ENST00000615234 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 VPS53Q5VIR6 699 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 RNF214Q8ND24 703 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
POLR2E-213ENST00000615234 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 ZNF790Q6PG37 636 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
POLR2E-213ENST00000615234 TSPY26PQ9H489 355 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
POLR2E-213ENST00000615234 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 C5P01031 1676 aa17.81■□□□□ 0.44
POLR2E-213ENST00000615234 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
POLR2E-213ENST00000615234 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.81■□□□□ 0.44
POLR2E-213ENST00000615234 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 TLR7Q9NYK1 1049 aaKnown RBP17.8■□□□□ 0.44
POLR2E-213ENST00000615234 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
POLR2E-213ENST00000615234 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
POLR2E-213ENST00000615234 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 CYP46A1Q9Y6A2 500 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 F13A1P00488 732 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 CCDC83Q8IWF9 413 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
POLR2E-213ENST00000615234 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
POLR2E-213ENST00000615234 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
POLR2E-213ENST00000615234 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
POLR2E-213ENST00000615234 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
POLR2E-213ENST00000615234 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms