RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
TNFRSF9-204ENST00000615230 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 H0YIN7 160 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 MX1P20591 662 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCDC96Q2M329 555 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 CNBD1Q8NA66 436 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 LUC7LQ9NQ29 371 aaKnown RBP11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 MYOM2P54296 1465 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 CLASP1Q7Z460 1538 aa11.46□□□□□ -0.58
TNFRSF9-204ENST00000615230 GNAT2P19087 354 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 STK38Q15208 465 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 KSR2Q6VAB6 950 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 SMARCE1Q969G3 411 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 GNPATO15228 680 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 KIF1BO60333 1816 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 OFD1O75665 1012 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 APBA3O96018 575 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 PDRG1Q9NUG6 133 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 TMEM266Q2M3C6 531 aa11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 PYM1Q9BRP8 204 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF9-204ENST00000615230 BCAR3O75815 825 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 KIF20AO95235 890 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCDC173Q0VFZ6 552 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 ANKARQ7Z5J8 1434 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 SMC2O95347 1197 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCP110O43303 1012 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 PPP1R12BO60237 982 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 BEGAINQ9BUH8 593 aa11.44□□□□□ -0.58
TNFRSF9-204ENST00000615230 A0A1W2PP64 1363 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 ZNF213O14771 459 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 TET3O43151 1660 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 LRRC27Q9C0I9 530 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 CNNM2Q9H8M5 875 aa11.43□□□□□ -0.58
TNFRSF9-204ENST00000615230 KRT23Q9C075 422 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 MBD3O95983 291 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 KIF24Q5T7B8 1368 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 SCLT1Q96NL6 688 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 CFAP45Q9UL16 551 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 ARHGAP31Q2M1Z3 1444 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 MATR3P43243 847 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 TMEM87AQ8NBN3 555 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 HMG20BQ9P0W2 317 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 LRRFIP2Q9Y608 721 aaKnown RBP11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 KAT14Q9H8E8 782 aa11.42□□□□□ -0.58
TNFRSF9-204ENST00000615230 SYNMO15061 1565 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 TMTC2Q8N394 836 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 TMEM57Q8N5G2 664 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 WDR33Q9C0J8 1336 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 GNAQP50148 359 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 STXBP4Q6ZWJ1 553 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 XAGE3Q8WTP9 111 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 ATP7BP35670 1465 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 DCTN1Q14203 1278 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 SLC12A7Q9Y666 1083 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 MINDY4BA8MYZ0 360 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 ARHGEF6Q15052 776 aa11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-204ENST00000615230 NEK4P51957 841 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 NAP1L5Q96NT1 182 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 SH2B1Q9NRF2 756 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 CDR1P51861 262 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 RARSP54136 660 aaKnown RBP11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 GPS2Q13227 327 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms