RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
VPS11-206ENST00000614944 EXOC5O00471 708 aa10.85□□□□□ -0.67
VPS11-206ENST00000614944 GOLGA6L3A6NEY3 463 aa10.85□□□□□ -0.67
VPS11-206ENST00000614944 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
VPS11-206ENST00000614944 CABP4P57796 275 aa10.84□□□□□ -0.67
VPS11-206ENST00000614944 EXOC6Q8TAG9 804 aa10.84□□□□□ -0.67
VPS11-206ENST00000614944 C20orf194Q5TEA3 1177 aa10.83□□□□□ -0.67
VPS11-206ENST00000614944 FMNL2Q96PY5 1086 aa10.83□□□□□ -0.67
VPS11-206ENST00000614944 STK31Q9BXU1 1019 aa10.83□□□□□ -0.67
VPS11-206ENST00000614944 LY75O60449 1722 aa10.83□□□□□ -0.68
VPS11-206ENST00000614944 PLIN1O60240 522 aa10.83□□□□□ -0.68
VPS11-206ENST00000614944 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
VPS11-206ENST00000614944 CGNQ9P2M7 1197 aaKnown RBP10.83□□□□□ -0.68
VPS11-206ENST00000614944 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
VPS11-206ENST00000614944 TEX13AQ9BXU3 409 aaPredicted RBP10.83□□□□□ -0.68
VPS11-206ENST00000614944 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 ARFGEF2Q9Y6D5 1785 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 DBF4Q9UBU7 674 aaPredicted RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 CCDC94Q9BW85 323 aaPredicted RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 GEMIN8Q9NWZ8 242 aaKnown RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 HYPKQ9NX55 129 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 XRCC6P12956 609 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS11-206ENST00000614944 CCT4P50991 539 aaKnown RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 YY1AP1Q9H869 796 aa10.82□□□□□ -0.68
VPS11-206ENST00000614944 TRPC5Q9UL62 973 aaPredicted RBP10.82□□□□□ -0.68
VPS11-206ENST00000614944 RLBP1P12271 317 aa10.81□□□□□ -0.68
VPS11-206ENST00000614944 IRX5P78411 483 aaPredicted RBP10.81□□□□□ -0.68
VPS11-206ENST00000614944 DDB1Q16531 1140 aa10.81□□□□□ -0.68
VPS11-206ENST00000614944 DDX21Q9NR30 783 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS11-206ENST00000614944 USP21Q9UK80 565 aa10.81□□□□□ -0.68
VPS11-206ENST00000614944 NUTM2BA6NNL0 878 aaPredicted RBP10.81□□□□□ -0.68
VPS11-206ENST00000614944 NUTM2EB1AL46 878 aaPredicted RBP10.81□□□□□ -0.68
VPS11-206ENST00000614944 HDGFL1Q5TGJ6 251 aa10.81□□□□□ -0.68
VPS11-206ENST00000614944 NUTM2AQ8IVF1 878 aaPredicted RBP10.81□□□□□ -0.68
VPS11-206ENST00000614944 MIS18AQ9NYP9 233 aa10.81□□□□□ -0.68
VPS11-206ENST00000614944 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
VPS11-206ENST00000614944 TTC5Q8N0Z6 440 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 ZBTB40Q9NUA8 1239 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 KRT24Q2M2I5 525 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 COL15A1P39059 1388 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 RGL2O15211 777 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 PDE4AP27815 886 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 HDAC1Q13547 482 aaPredicted RBP10.8□□□□□ -0.68
VPS11-206ENST00000614944 LRP10Q7Z4F1 713 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 GJD4Q96KN9 370 aaPredicted RBP10.8□□□□□ -0.68
VPS11-206ENST00000614944 TMOD3Q9NYL9 352 aa10.8□□□□□ -0.68
VPS11-206ENST00000614944 ANKRD36CQ5JPF3 1778 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 ZBTB7BO15156 539 aaPredicted RBP10.79□□□□□ -0.68
VPS11-206ENST00000614944 FLIIQ13045 1269 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 EGFL6Q8IUX8 553 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 CHMP4CQ96CF2 233 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 BTAF1O14981 1849 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 TCERG1O14776 1098 aaKnown RBP10.79□□□□□ -0.68
VPS11-206ENST00000614944 KCNQ3O43525 872 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 AFF2P51816 1311 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 PDIA6Q15084 440 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
VPS11-206ENST00000614944 ZNF496Q96IT1 587 aaPredicted RBP10.78□□□□□ -0.68
VPS11-206ENST00000614944 BCL2L13Q9BXK5 485 aa10.78□□□□□ -0.68
VPS11-206ENST00000614944 BCORQ6W2J9 1755 aa10.78□□□□□ -0.68
VPS11-206ENST00000614944 MARCH10Q8NA82 808 aaPredicted RBP10.78□□□□□ -0.68
VPS11-206ENST00000614944 HMGB2P26583 209 aaKnown RBP10.77□□□□□ -0.68
VPS11-206ENST00000614944 SETQ01105 290 aaPredicted RBP10.77□□□□□ -0.68
VPS11-206ENST00000614944 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.68
VPS11-206ENST00000614944 BACH2Q9BYV9 841 aa10.77□□□□□ -0.68
VPS11-206ENST00000614944 BRWD3Q6RI45 1802 aa10.77□□□□□ -0.68
VPS11-206ENST00000614944 CEP120Q8N960 986 aa10.77□□□□□ -0.69
VPS11-206ENST00000614944 FBXO41Q8TF61 875 aa10.77□□□□□ -0.69
VPS11-206ENST00000614944 PIGBQ92521 554 aa10.77□□□□□ -0.69
VPS11-206ENST00000614944 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
VPS11-206ENST00000614944 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
VPS11-206ENST00000614944 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
VPS11-206ENST00000614944 ELL2O00472 640 aaPredicted RBP10.77□□□□□ -0.69
VPS11-206ENST00000614944 DDX54Q8TDD1 881 aaKnown RBP10.77□□□□□ -0.69
VPS11-206ENST00000614944 UTYO14607 1347 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 TAF1LQ8IZX4 1826 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 ALDH1L1O75891 902 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
VPS11-206ENST00000614944 ZNF772Q68DY9 489 aaPredicted RBP10.76□□□□□ -0.69
VPS11-206ENST00000614944 ADCY9O60503 1353 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 OFD1O75665 1012 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 DDX58O95786 925 aaKnown RBP10.76□□□□□ -0.69
VPS11-206ENST00000614944 KSR2Q6VAB6 950 aa10.76□□□□□ -0.69
VPS11-206ENST00000614944 AFDNP55196 1824 aaKnown RBP10.75□□□□□ -0.69
VPS11-206ENST00000614944 CHPF2Q9P2E5 772 aa10.75□□□□□ -0.69
VPS11-206ENST00000614944 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
VPS11-206ENST00000614944 PRDM16Q9HAZ2 1276 aa10.75□□□□□ -0.69
VPS11-206ENST00000614944 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
VPS11-206ENST00000614944 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 NBPF20Q3BBV1 942 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 G2E3Q7L622 706 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms