RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
CDH5-208ENST00000614547 UHRF1BP1LA0JNW5 1464 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 TPM4P67936 248 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 CUL4AQ13619 759 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 ZSCAN31Q96LW9 406 aaPredicted RBP13.88□□□□□ -0.19
CDH5-208ENST00000614547 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 KIF18AQ8NI77 898 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
CDH5-208ENST00000614547 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
CDH5-208ENST00000614547 PTH1RQ03431 593 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
CDH5-208ENST00000614547 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
CDH5-208ENST00000614547 KRT222Q8N1A0 295 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 OGFRQ9NZT2 677 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 CHL1O00533 1208 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
CDH5-208ENST00000614547 KIF20AO95235 890 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 ZNF215Q9UL58 517 aaPredicted RBP13.87□□□□□ -0.19
CDH5-208ENST00000614547 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 CLTCL1P53675 1640 aa13.87□□□□□ -0.19
CDH5-208ENST00000614547 HSPA4P34932 840 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 SCAND2PQ9GZW5 306 aaPredicted RBP13.86□□□□□ -0.19
CDH5-208ENST00000614547 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 NDUFB9Q9Y6M9 179 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 KCNF1Q9H3M0 494 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 CCDC69A6NI79 296 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 SMTNL1A8MU46 457 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 SGSM2O43147 1006 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 ME3Q16798 604 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 TMC6Q7Z403 805 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
CDH5-208ENST00000614547 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 DDX17Q92841 729 aaKnown RBP13.85□□□□□ -0.19
CDH5-208ENST00000614547 JAK2O60674 1132 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
CDH5-208ENST00000614547 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 TEX35Q5T0J7 233 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 AOPEPQ8N6M6 819 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 ABTB2Q8N961 1025 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 UBXN4Q92575 508 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 BRF1Q92994 677 aa13.85□□□□□ -0.19
CDH5-208ENST00000614547 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
CDH5-208ENST00000614547 AP5Z1O43299 807 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 ZNF75DP51815 510 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
CDH5-208ENST00000614547 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 NR1I2O75469 434 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 STK38Q15208 465 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 CACTINQ8WUQ7 758 aaKnown RBP13.84□□□□□ -0.19
CDH5-208ENST00000614547 TRPM2O94759 1503 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
CDH5-208ENST00000614547 SYT10Q6XYQ8 523 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 FSIP1Q8NA03 581 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 ECHDC1Q9NTX5 307 aa13.84□□□□□ -0.19
CDH5-208ENST00000614547 DDX19AQ9NUU7 478 aaKnown RBP13.84□□□□□ -0.19
CDH5-208ENST00000614547 PSME1Q06323 249 aa13.83□□□□□ -0.19
CDH5-208ENST00000614547 CHST3Q7LGC8 479 aa13.83□□□□□ -0.19
CDH5-208ENST00000614547 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.19
CDH5-208ENST00000614547 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.19
CDH5-208ENST00000614547 MYL6BP14649 208 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
CDH5-208ENST00000614547 SNW1Q13573 536 aaKnown RBP13.83□□□□□ -0.2
CDH5-208ENST00000614547 EDC3Q96F86 508 aaKnown RBP13.83□□□□□ -0.2
CDH5-208ENST00000614547 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 IQGAP3Q86VI3 1631 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 RAD50Q92878 1312 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 SERPINC1P01008 464 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
CDH5-208ENST00000614547 CPLX1O14810 134 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 SFPQP23246 707 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDH5-208ENST00000614547 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 FEZ1Q99689 392 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 ST7Q9NRC1 585 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 DNAI1Q9UI46 699 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 KCNA6P17658 529 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 UTP14CQ5TAP6 766 aaKnown RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 CREB3L3Q68CJ9 461 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 BRPF1P55201 1214 aaPredicted RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 TPCN1Q9ULQ1 816 aa13.82□□□□□ -0.2
CDH5-208ENST00000614547 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
CDH5-208ENST00000614547 PDE4CQ08493 712 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 TIGD1Q96MW7 591 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 TMCO3Q6UWJ1 677 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms