RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
TARDBP-216ENST00000614494 GLTPD2A6NH11 291 aa9.61□□□□□ -0.87
TARDBP-216ENST00000614494 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
TARDBP-216ENST00000614494 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.873e-7■■■□□ 15.3
TARDBP-216ENST00000614494 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
TARDBP-216ENST00000614494 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
TARDBP-216ENST00000614494 NMRK2Q9NPI5 230 aa9.61□□□□□ -0.87
TARDBP-216ENST00000614494 PRR5LQ6MZQ0 368 aa9.6□□□□□ -0.87
TARDBP-216ENST00000614494 DZIP3Q86Y13 1208 aaKnown RBP9.6□□□□□ -0.87
TARDBP-216ENST00000614494 REM2Q8IYK8 340 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-216ENST00000614494 TAOK3Q9H2K8 898 aa9.6□□□□□ -0.87
TARDBP-216ENST00000614494 ZNF330Q9Y3S2 320 aaPredicted RBP9.6□□□□□ -0.87
TARDBP-216ENST00000614494 AFDNP55196 1824 aaKnown RBP9.6□□□□□ -0.87
TARDBP-216ENST00000614494 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
TARDBP-216ENST00000614494 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 BCORQ6W2J9 1755 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 CEP350Q5VT06 3117 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 IBTKQ9P2D0 1353 aaPredicted RBP9.59□□□□□ -0.87
TARDBP-216ENST00000614494 WDR90Q96KV7 1748 aa9.59□□□□□ -0.87
TARDBP-216ENST00000614494 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 NPR1P16066 1061 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
TARDBP-216ENST00000614494 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
TARDBP-216ENST00000614494 NYXQ9GZU5 481 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 TIAM2Q8IVF5 1701 aa9.58□□□□□ -0.88
TARDBP-216ENST00000614494 MAPK8IP3Q9UPT6 1336 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 RIC1Q4ADV7 1423 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 SRGNP10124 158 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 LMOD3Q0VAK6 560 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 RTKN2Q8IZC4 609 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 PHACTR3Q96KR7 559 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 BABAM1Q9NWV8 329 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 ARFGEF2Q9Y6D5 1785 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 SBF1O95248 1867 aa9.57□□□□□ -0.88
TARDBP-216ENST00000614494 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 LAMB4A4D0S4 1761 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 KLRG2A4D1S0 409 aaPredicted RBP9.56□□□□□ -0.88
TARDBP-216ENST00000614494 ERVV-1B6SEH8 477 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 NFKBIEO00221 500 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.882e-7■■□□□ 11.5
TARDBP-216ENST00000614494 RASSF7Q02833 373 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
TARDBP-216ENST00000614494 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
TARDBP-216ENST00000614494 A1BGP04217 495 aa9.55□□□□□ -0.88
TARDBP-216ENST00000614494 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-216ENST00000614494 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
TARDBP-216ENST00000614494 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
TARDBP-216ENST00000614494 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-216ENST00000614494 FER1L6Q2WGJ9 1857 aa9.54□□□□□ -0.88
TARDBP-216ENST00000614494 ANKRD31Q8N7Z5 1873 aa9.54□□□□□ -0.88
TARDBP-216ENST00000614494 C21orf2O43822 256 aa9.54□□□□□ -0.88
TARDBP-216ENST00000614494 RALBP1Q15311 655 aa9.54□□□□□ -0.88
TARDBP-216ENST00000614494 MCM10Q7L590 875 aa9.54□□□□□ -0.88
TARDBP-216ENST00000614494 L3MBTL3Q96JM7 780 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-216ENST00000614494 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
TARDBP-216ENST00000614494 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-216ENST00000614494 DICER1Q9UPY3 1922 aaKnown RBP9.53□□□□□ -0.88
TARDBP-216ENST00000614494 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
TARDBP-216ENST00000614494 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
TARDBP-216ENST00000614494 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
TARDBP-216ENST00000614494 PNMA8AQ86V59 439 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-216ENST00000614494 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
TARDBP-216ENST00000614494 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-216ENST00000614494 CRY2Q49AN0 593 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 LDHDQ86WU2 507 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 PSMD1Q99460 953 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 VPS33BQ9H267 617 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 CREBZFQ9NS37 354 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
TARDBP-216ENST00000614494 KDM3BQ7LBC6 1761 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 PPP1R42Q7Z4L9 355 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
TARDBP-216ENST00000614494 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 SCN4AP35499 1836 aa9.51□□□□□ -0.89
TARDBP-216ENST00000614494 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
TARDBP-216ENST00000614494 KCNQ3O43525 872 aa9.5□□□□□ -0.89
TARDBP-216ENST00000614494 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-216ENST00000614494 NBPF10Q6P3W6 841 aaKnown RBP9.5□□□□□ -0.89
TARDBP-216ENST00000614494 GPC2Q8N158 579 aa9.5□□□□□ -0.89
TARDBP-216ENST00000614494 NBPF15Q8N660 670 aa9.5□□□□□ -0.89
TARDBP-216ENST00000614494 C7orf43Q8WVR3 580 aa9.5□□□□□ -0.89
TARDBP-216ENST00000614494 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
TARDBP-216ENST00000614494 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms