RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
SCAMP1-205ENST00000614488 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
SCAMP1-205ENST00000614488 ZCCHC2Q9C0B9 1178 aaKnown RBP9.92□□□□□ -0.82
SCAMP1-205ENST00000614488 ATXN7O15265 892 aaPredicted RBP9.91□□□□□ -0.82
SCAMP1-205ENST00000614488 FAM157BP0CG42 384 aa9.91□□□□□ -0.82
SCAMP1-205ENST00000614488 HIF1AQ16665 826 aa9.91□□□□□ -0.82
SCAMP1-205ENST00000614488 CXXC1Q9P0U4 656 aaPredicted RBP9.91□□□□□ -0.82
SCAMP1-205ENST00000614488 TMEM88BA6NKF7 163 aa9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 BNIP3LO60238 219 aa9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 NEUROD4Q9HD90 331 aa9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.827e-6■■■■■ 74.5
SCAMP1-205ENST00000614488 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
SCAMP1-205ENST00000614488 MX2P20592 715 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 ABHD17AQ96GS6 310 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 MYO19Q96H55 970 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 USTQ9Y2C2 406 aa9.89□□□□□ -0.83
SCAMP1-205ENST00000614488 SLURP2P0DP57 97 aa9.88□□□□□ -0.83
SCAMP1-205ENST00000614488 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
SCAMP1-205ENST00000614488 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
SCAMP1-205ENST00000614488 EFSO43281 561 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 FGFR3P22607 806 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 ATP2B4P23634 1241 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 TNP2Q05952 138 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 IER5Q5VY09 327 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 SUSD3Q96L08 255 aa9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 QTRT2Q9H974 415 aaKnown RBP9.87□□□□□ -0.83
SCAMP1-205ENST00000614488 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 MAP2K3P46734 347 aa9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 KLRG1Q96E93 195 aa9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 HSH2DQ96JZ2 352 aa9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 IGF1RP08069 1367 aa9.86□□□□□ -0.83
SCAMP1-205ENST00000614488 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
SCAMP1-205ENST00000614488 KHNYNO15037 678 aaKnown RBP9.85□□□□□ -0.83
SCAMP1-205ENST00000614488 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
SCAMP1-205ENST00000614488 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
SCAMP1-205ENST00000614488 ZSCAN1Q8NBB4 408 aa9.85□□□□□ -0.83
SCAMP1-205ENST00000614488 TGFBR3LH3BV60 316 aa9.84□□□□□ -0.83
SCAMP1-205ENST00000614488 ZNF280CQ8ND82 737 aa9.84□□□□□ -0.83
SCAMP1-205ENST00000614488 TYRO3Q06418 890 aa9.83□□□□□ -0.84
SCAMP1-205ENST00000614488 BMP4P12644 408 aa9.82□□□□□ -0.84
SCAMP1-205ENST00000614488 DGKZQ13574 1117 aa9.82□□□□□ -0.84
SCAMP1-205ENST00000614488 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
SCAMP1-205ENST00000614488 MARK1Q9P0L2 795 aa9.82□□□□□ -0.84
SCAMP1-205ENST00000614488 HCN2Q9UL51 889 aa9.82□□□□□ -0.84
SCAMP1-205ENST00000614488 KCNQ4P56696 695 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 CTBSQ01459 385 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 C11orf91Q3C1V1 193 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 BTLAQ7Z6A9 289 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 BRD7Q9NPI1 651 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 BCS1LQ9Y276 419 aa9.81□□□□□ -0.84
SCAMP1-205ENST00000614488 CD33P20138 364 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 SSFA2P28290 1259 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 PDE4CQ08493 712 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 COX20Q5RI15 118 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 C16orf46Q6P387 395 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 KLK14Q9P0G3 267 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 DMGDHQ9UI17 866 aaKnown RBP9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
SCAMP1-205ENST00000614488 C2CD2LO14523 706 aa9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
SCAMP1-205ENST00000614488 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-205ENST00000614488 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-205ENST00000614488 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
SCAMP1-205ENST00000614488 GDF2Q9UK05 429 aaPredicted RBP9.78□□□□□ -0.84
SCAMP1-205ENST00000614488 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 ARAFP10398 606 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 CAPN12Q6ZSI9 719 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 ACDQ96AP0 544 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 SAP130Q9H0E3 1048 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
SCAMP1-205ENST00000614488 CARNS1A5YM72 827 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 SFSWAPQ12872 951 aaKnown RBP9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 LYPD4Q6UWN0 246 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 SVOPQ8N4V2 548 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
SCAMP1-205ENST00000614488 BCRP11274 1271 aa9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 EPB42P16452 691 aa9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 BRD2P25440 801 aaKnown RBP9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 IDH3AP50213 366 aa9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 MAP3K10Q02779 954 aa9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 NAA30Q147X3 362 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 ZNF468Q5VIY5 522 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
SCAMP1-205ENST00000614488 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms