RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
CCL4-201ENST00000613947 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
CCL4-201ENST00000613947 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
CCL4-201ENST00000613947 UTRNP46939 3433 aa16.52■□□□□ 0.24
CCL4-201ENST00000613947 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
CCL4-201ENST00000613947 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
CCL4-201ENST00000613947 MMP10P09238 476 aa16.51■□□□□ 0.23
CCL4-201ENST00000613947 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
CCL4-201ENST00000613947 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
CCL4-201ENST00000613947 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
CCL4-201ENST00000613947 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
CCL4-201ENST00000613947 XAGE3Q8WTP9 111 aa16.5■□□□□ 0.23
CCL4-201ENST00000613947 LRP5O75197 1615 aa16.5■□□□□ 0.23
CCL4-201ENST00000613947 HLFQ16534 295 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
CCL4-201ENST00000613947 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 TM4SF1P30408 202 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 NFIXQ14938 502 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 MAP3K15Q6ZN16 1313 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
CCL4-201ENST00000613947 TBC1D9BQ66K14 1250 aa16.48■□□□□ 0.23
CCL4-201ENST00000613947 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
CCL4-201ENST00000613947 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
CCL4-201ENST00000613947 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
CCL4-201ENST00000613947 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
CCL4-201ENST00000613947 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CCL4-201ENST00000613947 DDR1Q08345 913 aa16.47■□□□□ 0.23
CCL4-201ENST00000613947 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
CCL4-201ENST00000613947 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
CCL4-201ENST00000613947 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
CCL4-201ENST00000613947 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
CCL4-201ENST00000613947 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.22
CCL4-201ENST00000613947 RGL2O15211 777 aa16.45■□□□□ 0.22
CCL4-201ENST00000613947 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
CCL4-201ENST00000613947 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
CCL4-201ENST00000613947 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
CCL4-201ENST00000613947 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
CCL4-201ENST00000613947 G2E3Q7L622 706 aa16.44■□□□□ 0.22
CCL4-201ENST00000613947 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
CCL4-201ENST00000613947 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
CCL4-201ENST00000613947 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCL4-201ENST00000613947 SERPINB2P05120 415 aa16.43■□□□□ 0.22
CCL4-201ENST00000613947 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
CCL4-201ENST00000613947 NUP98P52948 1817 aa16.43■□□□□ 0.22
CCL4-201ENST00000613947 GPTP24298 496 aa16.42■□□□□ 0.22
CCL4-201ENST00000613947 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 FLIIQ13045 1269 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
CCL4-201ENST00000613947 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
CCL4-201ENST00000613947 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
CCL4-201ENST00000613947 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
CCL4-201ENST00000613947 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
CCL4-201ENST00000613947 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
CCL4-201ENST00000613947 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 DDX58O95786 925 aaKnown RBP16.39■□□□□ 0.21
CCL4-201ENST00000613947 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
CCL4-201ENST00000613947 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
CCL4-201ENST00000613947 HSP90AB3PQ58FF7 597 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 PRR5LQ6MZQ0 368 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 KSR2Q6VAB6 950 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
CCL4-201ENST00000613947 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
CCL4-201ENST00000613947 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
CCL4-201ENST00000613947 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 MAP3K2Q9Y2U5 619 aa16.38■□□□□ 0.21
CCL4-201ENST00000613947 ADCY9O60503 1353 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 TPTE2Q6XPS3 522 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
CCL4-201ENST00000613947 NPHP1O15259 732 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
CCL4-201ENST00000613947 MYD88Q99836 296 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
CCL4-201ENST00000613947 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
CCL4-201ENST00000613947 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
CCL4-201ENST00000613947 ARFGEF2Q9Y6D5 1785 aa16.35■□□□□ 0.21
CCL4-201ENST00000613947 F6X3S4 739 aa16.34■□□□□ 0.21
CCL4-201ENST00000613947 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
CCL4-201ENST00000613947 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
CCL4-201ENST00000613947 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
CCL4-201ENST00000613947 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
CCL4-201ENST00000613947 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms