RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CABP4P57796 275 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 DDR1Q08345 913 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
SLIRP-212ENST00000613856 NLGN1Q8N2Q7 840 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 CCDC87Q9NVE4 849 aa14.69□□□□□ -0.06
SLIRP-212ENST00000613856 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
SLIRP-212ENST00000613856 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
SLIRP-212ENST00000613856 RASSF7Q02833 373 aa14.68□□□□□ -0.06
SLIRP-212ENST00000613856 NFATC2IPQ8NCF5 419 aa14.68□□□□□ -0.06
SLIRP-212ENST00000613856 TIAM2Q8IVF5 1701 aa14.67□□□□□ -0.06
SLIRP-212ENST00000613856 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
SLIRP-212ENST00000613856 BRPF1P55201 1214 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-212ENST00000613856 FSTL1Q12841 308 aa14.67□□□□□ -0.06
SLIRP-212ENST00000613856 FKBP8Q14318 412 aa14.67□□□□□ -0.06
SLIRP-212ENST00000613856 ZNF790Q6PG37 636 aa14.67□□□□□ -0.06
SLIRP-212ENST00000613856 PARP3Q9Y6F1 533 aa14.67□□□□□ -0.06
SLIRP-212ENST00000613856 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
SLIRP-212ENST00000613856 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
SLIRP-212ENST00000613856 RFC4P35249 363 aa14.66□□□□□ -0.06
SLIRP-212ENST00000613856 KRT24Q2M2I5 525 aa14.66□□□□□ -0.06
SLIRP-212ENST00000613856 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-212ENST00000613856 KCNQ3O43525 872 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 BCAR3O75815 825 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 NEFLP07196 543 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
SLIRP-212ENST00000613856 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
SLIRP-212ENST00000613856 SSH1Q8WYL5 1049 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 PIM2Q9P1W9 311 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
SLIRP-212ENST00000613856 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
SLIRP-212ENST00000613856 DALRD3Q5D0E6 543 aaKnown RBP14.64□□□□□ -0.07
SLIRP-212ENST00000613856 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
SLIRP-212ENST00000613856 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
SLIRP-212ENST00000613856 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
SLIRP-212ENST00000613856 DLEC1Q9Y238 1755 aa14.64□□□□□ -0.07
SLIRP-212ENST00000613856 KDM2BQ8NHM5 1336 aa14.64□□□□□ -0.07
SLIRP-212ENST00000613856 ELL2O00472 640 aaPredicted RBP14.63□□□□□ -0.07
SLIRP-212ENST00000613856 ADRA2BP18089 450 aa14.63□□□□□ -0.07
SLIRP-212ENST00000613856 CRKLP46109 303 aaKnown RBP14.63□□□□□ -0.07
SLIRP-212ENST00000613856 USP42Q9H9J4 1324 aaKnown RBP14.63□□□□□ -0.07
SLIRP-212ENST00000613856 SLC39A6Q13433 755 aa14.62□□□□□ -0.07
SLIRP-212ENST00000613856 MRPL50Q8N5N7 158 aaKnown RBP14.62□□□□□ -0.07
SLIRP-212ENST00000613856 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
SLIRP-212ENST00000613856 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
SLIRP-212ENST00000613856 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
SLIRP-212ENST00000613856 POLRMTO00411 1230 aaKnown RBP14.61□□□□□ -0.07
SLIRP-212ENST00000613856 CCDC30Q5VVM6 783 aa14.61□□□□□ -0.07
SLIRP-212ENST00000613856 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
SLIRP-212ENST00000613856 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-212ENST00000613856 HDGFL1Q5TGJ6 251 aa14.6□□□□□ -0.07
SLIRP-212ENST00000613856 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
SLIRP-212ENST00000613856 POTECB2RU33 542 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 SNRPA1P09661 255 aaKnown RBP14.59□□□□□ -0.07
SLIRP-212ENST00000613856 PDE3AQ14432 1141 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 INTS5Q6P9B9 1019 aaKnown RBP14.59□□□□□ -0.07
SLIRP-212ENST00000613856 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 STK31Q9BXU1 1019 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
SLIRP-212ENST00000613856 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
SLIRP-212ENST00000613856 PLIN1O60240 522 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 MS4A1P11836 297 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
SLIRP-212ENST00000613856 TM4SF1P30408 202 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 GTF3C3Q9Y5Q9 886 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 ANKRD31Q8N7Z5 1873 aa14.58□□□□□ -0.08
SLIRP-212ENST00000613856 USPL1Q5W0Q7 1092 aa14.57□□□□□ -0.08
SLIRP-212ENST00000613856 PTPRCP08575 1304 aa14.57□□□□□ -0.08
SLIRP-212ENST00000613856 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
SLIRP-212ENST00000613856 COL11A2P13942 1736 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-212ENST00000613856 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
SLIRP-212ENST00000613856 NFKBIEO00221 500 aa14.56□□□□□ -0.08
SLIRP-212ENST00000613856 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
SLIRP-212ENST00000613856 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
SLIRP-212ENST00000613856 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
SLIRP-212ENST00000613856 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
SLIRP-212ENST00000613856 PRAMEF22A3QJZ6 481 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 TRIM27P14373 513 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 NFIXQ14938 502 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 DNAJC10Q8IXB1 793 aa14.55□□□□□ -0.08
SLIRP-212ENST00000613856 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
SLIRP-212ENST00000613856 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-212ENST00000613856 TCERG1O14776 1098 aaKnown RBP14.54□□□□□ -0.08
SLIRP-212ENST00000613856 VEGFAP15692 232 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-212ENST00000613856 EIF2S2P20042 333 aaKnown RBP14.54□□□□□ -0.08
SLIRP-212ENST00000613856 LMNB1P20700 586 aa14.54□□□□□ -0.08
SLIRP-212ENST00000613856 IRX6P78412 446 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-212ENST00000613856 C20orf194Q5TEA3 1177 aa14.54□□□□□ -0.08
SLIRP-212ENST00000613856 TEX13AQ9BXU3 409 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-212ENST00000613856 BCL2L12Q9HB09 334 aa14.54□□□□□ -0.08
SLIRP-212ENST00000613856 CHPF2Q9P2E5 772 aa14.54□□□□□ -0.08
SLIRP-212ENST00000613856 ABCC4O15439 1325 aa14.54□□□□□ -0.08
SLIRP-212ENST00000613856 FER1L6Q2WGJ9 1857 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms