RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 PTH1RQ03431 593 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 TNMDQ9H2S6 317 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 KDM4AO75164 1064 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
HPS1-215ENST00000613394 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
HPS1-215ENST00000613394 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
HPS1-215ENST00000613394 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
HPS1-215ENST00000613394 IFT172Q9UG01 1749 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 SPATA32Q96LK8 384 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 LARGE1O95461 756 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 PSMA5P28066 241 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 HS1BP3Q53T59 392 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 RAD50Q92878 1312 aa16.44■□□□□ 0.22
HPS1-215ENST00000613394 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
HPS1-215ENST00000613394 KCNA6P17658 529 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 CUL4AQ13619 759 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
HPS1-215ENST00000613394 SSH3Q8TE77 659 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
HPS1-215ENST00000613394 TTC21AQ8NDW8 1320 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 BECN2A8MW95 431 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
HPS1-215ENST00000613394 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
HPS1-215ENST00000613394 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
HPS1-215ENST00000613394 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
HPS1-215ENST00000613394 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
HPS1-215ENST00000613394 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
HPS1-215ENST00000613394 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
HPS1-215ENST00000613394 ERC1Q8IUD2 1116 aa16.42■□□□□ 0.22
HPS1-215ENST00000613394 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
HPS1-215ENST00000613394 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
HPS1-215ENST00000613394 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
HPS1-215ENST00000613394 SETD1BQ9UPS6 1966 aaKnown RBP16.41■□□□□ 0.22
HPS1-215ENST00000613394 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
HPS1-215ENST00000613394 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
HPS1-215ENST00000613394 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
HPS1-215ENST00000613394 MCM5P33992 734 aa16.41■□□□□ 0.22
HPS1-215ENST00000613394 PDCP20941 246 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 CBX1P83916 185 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 STAP2Q9UGK3 403 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
HPS1-215ENST00000613394 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 MYD88Q99836 296 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
HPS1-215ENST00000613394 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
HPS1-215ENST00000613394 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
HPS1-215ENST00000613394 USP6P35125 1406 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 CREB3L3Q68CJ9 461 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 LUZP1Q86V48 1076 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
HPS1-215ENST00000613394 NPHP1O15259 732 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
HPS1-215ENST00000613394 ME3Q16798 604 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
HPS1-215ENST00000613394 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
HPS1-215ENST00000613394 C16orf45Q96MC5 204 aaPredicted RBP16.38■□□□□ 0.21
HPS1-215ENST00000613394 SH2B1Q9NRF2 756 aaPredicted RBP16.38■□□□□ 0.21
HPS1-215ENST00000613394 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 CRB1P82279 1406 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
HPS1-215ENST00000613394 RGS12O14924 1447 aa16.38■□□□□ 0.21
HPS1-215ENST00000613394 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
HPS1-215ENST00000613394 BICC1Q9H694 974 aaKnown RBP16.37■□□□□ 0.21
HPS1-215ENST00000613394 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
HPS1-215ENST00000613394 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
HPS1-215ENST00000613394 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
HPS1-215ENST00000613394 DYNC1I1O14576 645 aa16.37■□□□□ 0.21
HPS1-215ENST00000613394 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
HPS1-215ENST00000613394 CDC37L1Q7L3B6 337 aa16.37■□□□□ 0.21
HPS1-215ENST00000613394 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
HPS1-215ENST00000613394 GRM8O00222 908 aa16.36■□□□□ 0.21
HPS1-215ENST00000613394 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
HPS1-215ENST00000613394 PTGS1P23219 599 aa16.36■□□□□ 0.21
HPS1-215ENST00000613394 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
HPS1-215ENST00000613394 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms