RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
NCAM1-220ENST00000613217 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCAM1-220ENST00000613217 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
NCAM1-220ENST00000613217 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
NCAM1-220ENST00000613217 NPR1P16066 1061 aa16.43■□□□□ 0.22
NCAM1-220ENST00000613217 HTRA3P83110 453 aa16.43■□□□□ 0.22
NCAM1-220ENST00000613217 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
NCAM1-220ENST00000613217 PRELPP51888 382 aa16.42■□□□□ 0.22
NCAM1-220ENST00000613217 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
NCAM1-220ENST00000613217 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
NCAM1-220ENST00000613217 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
NCAM1-220ENST00000613217 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
NCAM1-220ENST00000613217 ALDH1B1P30837 517 aa16.41■□□□□ 0.22
NCAM1-220ENST00000613217 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
NCAM1-220ENST00000613217 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
NCAM1-220ENST00000613217 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
NCAM1-220ENST00000613217 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
NCAM1-220ENST00000613217 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
NCAM1-220ENST00000613217 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
NCAM1-220ENST00000613217 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
NCAM1-220ENST00000613217 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
NCAM1-220ENST00000613217 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.22
NCAM1-220ENST00000613217 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
NCAM1-220ENST00000613217 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
NCAM1-220ENST00000613217 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
NCAM1-220ENST00000613217 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
NCAM1-220ENST00000613217 LDHDQ86WU2 507 aa16.39■□□□□ 0.21
NCAM1-220ENST00000613217 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
NCAM1-220ENST00000613217 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.21
NCAM1-220ENST00000613217 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
NCAM1-220ENST00000613217 CCDC88AQ3V6T2 1871 aa16.38■□□□□ 0.21
NCAM1-220ENST00000613217 POTECB2RU33 542 aa16.38■□□□□ 0.21
NCAM1-220ENST00000613217 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCAM1-220ENST00000613217 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
NCAM1-220ENST00000613217 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
NCAM1-220ENST00000613217 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
NCAM1-220ENST00000613217 KCNQ3O43525 872 aa16.37■□□□□ 0.21
NCAM1-220ENST00000613217 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
NCAM1-220ENST00000613217 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
NCAM1-220ENST00000613217 MCM10Q7L590 875 aa16.37■□□□□ 0.21
NCAM1-220ENST00000613217 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
NCAM1-220ENST00000613217 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
NCAM1-220ENST00000613217 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
NCAM1-220ENST00000613217 HSPA1AP0DMV8 641 aaKnown RBP16.36■□□□□ 0.21
NCAM1-220ENST00000613217 HSPA1BP0DMV9 641 aaKnown RBP16.36■□□□□ 0.21
NCAM1-220ENST00000613217 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
NCAM1-220ENST00000613217 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
NCAM1-220ENST00000613217 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
NCAM1-220ENST00000613217 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
NCAM1-220ENST00000613217 JDP2Q8WYK2 163 aa16.34■□□□□ 0.21
NCAM1-220ENST00000613217 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
NCAM1-220ENST00000613217 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
NCAM1-220ENST00000613217 SCN4AP35499 1836 aa16.33■□□□□ 0.21
NCAM1-220ENST00000613217 PSMD1Q99460 953 aa16.33■□□□□ 0.2
NCAM1-220ENST00000613217 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
NCAM1-220ENST00000613217 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
NCAM1-220ENST00000613217 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
NCAM1-220ENST00000613217 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
NCAM1-220ENST00000613217 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
NCAM1-220ENST00000613217 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
NCAM1-220ENST00000613217 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
NCAM1-220ENST00000613217 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
NCAM1-220ENST00000613217 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
NCAM1-220ENST00000613217 TMEM88BA6NKF7 163 aa16.31■□□□□ 0.2
NCAM1-220ENST00000613217 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
NCAM1-220ENST00000613217 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
NCAM1-220ENST00000613217 GPC2Q8N158 579 aa16.31■□□□□ 0.2
NCAM1-220ENST00000613217 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
NCAM1-220ENST00000613217 PCNTO95613 3336 aa16.3■□□□□ 0.2
NCAM1-220ENST00000613217 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
NCAM1-220ENST00000613217 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
NCAM1-220ENST00000613217 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
NCAM1-220ENST00000613217 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
NCAM1-220ENST00000613217 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
NCAM1-220ENST00000613217 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
NCAM1-220ENST00000613217 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 PASKQ96RG2 1323 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 FAM177BA6PVY3 158 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 FZD9O00144 591 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
NCAM1-220ENST00000613217 EPHX2P34913 555 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 EAPPQ56P03 285 aaPredicted RBP16.29■□□□□ 0.2
NCAM1-220ENST00000613217 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
NCAM1-220ENST00000613217 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
NCAM1-220ENST00000613217 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
NCAM1-220ENST00000613217 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
NCAM1-220ENST00000613217 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
NCAM1-220ENST00000613217 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
NCAM1-220ENST00000613217 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
NCAM1-220ENST00000613217 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 HLFQ16534 295 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 PARP10Q53GL7 1025 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.2
NCAM1-220ENST00000613217 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
NCAM1-220ENST00000613217 CAPN15O75808 1086 aa16.26■□□□□ 0.19
NCAM1-220ENST00000613217 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms