RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
CSTF1-208ENST00000613138 YY1P25490 414 aa16.54■□□□□ 0.24
CSTF1-208ENST00000613138 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
CSTF1-208ENST00000613138 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
CSTF1-208ENST00000613138 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
CSTF1-208ENST00000613138 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
CSTF1-208ENST00000613138 ZBTB3Q9H5J0 574 aa16.53■□□□□ 0.24
CSTF1-208ENST00000613138 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
CSTF1-208ENST00000613138 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
CSTF1-208ENST00000613138 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
CSTF1-208ENST00000613138 WWC1Q8IX03 1113 aa16.52■□□□□ 0.24
CSTF1-208ENST00000613138 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
CSTF1-208ENST00000613138 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.23
CSTF1-208ENST00000613138 TGFB2P61812 414 aa16.51■□□□□ 0.23
CSTF1-208ENST00000613138 C8orf58Q8NAV2 365 aa16.51■□□□□ 0.23
CSTF1-208ENST00000613138 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
CSTF1-208ENST00000613138 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
CSTF1-208ENST00000613138 BCS1LQ9Y276 419 aa16.51■□□□□ 0.23
CSTF1-208ENST00000613138 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
CSTF1-208ENST00000613138 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
CSTF1-208ENST00000613138 GPTP24298 496 aa16.5■□□□□ 0.23
CSTF1-208ENST00000613138 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
CSTF1-208ENST00000613138 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
CSTF1-208ENST00000613138 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
CSTF1-208ENST00000613138 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
CSTF1-208ENST00000613138 GNAI1P63096 354 aa16.49■□□□□ 0.23
CSTF1-208ENST00000613138 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
CSTF1-208ENST00000613138 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
CSTF1-208ENST00000613138 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CSTF1-208ENST00000613138 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
CSTF1-208ENST00000613138 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
CSTF1-208ENST00000613138 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
CSTF1-208ENST00000613138 COPS6Q7L5N1 327 aa16.48■□□□□ 0.23
CSTF1-208ENST00000613138 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
CSTF1-208ENST00000613138 ERBB4Q15303 1308 aa16.46■□□□□ 0.23
CSTF1-208ENST00000613138 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
CSTF1-208ENST00000613138 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
CSTF1-208ENST00000613138 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
CSTF1-208ENST00000613138 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSTF1-208ENST00000613138 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
CSTF1-208ENST00000613138 ABCC12Q96J65 1359 aa16.46■□□□□ 0.23
CSTF1-208ENST00000613138 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
CSTF1-208ENST00000613138 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
CSTF1-208ENST00000613138 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
CSTF1-208ENST00000613138 SBF1O95248 1867 aa16.45■□□□□ 0.22
CSTF1-208ENST00000613138 ERVV-1B6SEH8 477 aa16.44■□□□□ 0.22
CSTF1-208ENST00000613138 NPHP1O15259 732 aa16.44■□□□□ 0.22
CSTF1-208ENST00000613138 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
CSTF1-208ENST00000613138 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
CSTF1-208ENST00000613138 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
CSTF1-208ENST00000613138 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
CSTF1-208ENST00000613138 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
CSTF1-208ENST00000613138 ATP10DQ9P241 1426 aa16.44■□□□□ 0.22
CSTF1-208ENST00000613138 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
CSTF1-208ENST00000613138 ARHGAP27Q6ZUM4 889 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 SLC51AQ86UW1 340 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 ZNF34Q8IZ26 560 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 ZNF622Q969S3 477 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSTF1-208ENST00000613138 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 LAMB2P55268 1798 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
CSTF1-208ENST00000613138 TAF1P21675 1872 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 HOXB7P09629 217 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 ST5P78524 1137 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 MIER1Q8N108 512 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 SYNE4Q8N205 404 aa16.42■□□□□ 0.22
CSTF1-208ENST00000613138 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
CSTF1-208ENST00000613138 H0YIN7 160 aa16.41■□□□□ 0.22
CSTF1-208ENST00000613138 RASSF7Q02833 373 aa16.41■□□□□ 0.22
CSTF1-208ENST00000613138 NTSR2O95665 410 aa16.4■□□□□ 0.22
CSTF1-208ENST00000613138 PRELPP51888 382 aa16.4■□□□□ 0.22
CSTF1-208ENST00000613138 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
CSTF1-208ENST00000613138 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
CSTF1-208ENST00000613138 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 SRGNP10124 158 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 PDE6BP35913 854 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
CSTF1-208ENST00000613138 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 G2E3Q7L622 706 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 IL16Q14005 1332 aa16.39■□□□□ 0.21
CSTF1-208ENST00000613138 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
CSTF1-208ENST00000613138 RGL2O15211 777 aa16.38■□□□□ 0.21
CSTF1-208ENST00000613138 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
CSTF1-208ENST00000613138 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
CSTF1-208ENST00000613138 WDR63Q8IWG1 891 aa16.38■□□□□ 0.21
CSTF1-208ENST00000613138 DDX60Q8IY21 1712 aaKnown RBP16.38■□□□□ 0.21
CSTF1-208ENST00000613138 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
CSTF1-208ENST00000613138 C21orf2O43822 256 aa16.37■□□□□ 0.21
CSTF1-208ENST00000613138 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
CSTF1-208ENST00000613138 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
CSTF1-208ENST00000613138 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
CSTF1-208ENST00000613138 ZNF526Q8TF50 670 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 282.9 ms