RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
SYNRG-217ENST00000612223 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
SYNRG-217ENST00000612223 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
SYNRG-217ENST00000612223 CALRP27797 417 aaKnown RBP16.69■□□□□ 0.26
SYNRG-217ENST00000612223 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
SYNRG-217ENST00000612223 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
SYNRG-217ENST00000612223 PABPN1LA6NDY0 278 aaKnown RBP16.68■□□□□ 0.26
SYNRG-217ENST00000612223 FILIP1Q7Z7B0 1213 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
SYNRG-217ENST00000612223 CALML4Q96GE6 196 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 AKNAQ7Z591 1439 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 HAND2P61296 217 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 KIF5BP33176 963 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 CCDC178Q5BJE1 867 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 IQCEQ6IPM2 695 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 NLRP3Q96P20 1036 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 PODXL2Q9NZ53 605 aa16.68■□□□□ 0.26
SYNRG-217ENST00000612223 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
SYNRG-217ENST00000612223 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 PRC1O43663 620 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
SYNRG-217ENST00000612223 IDEP14735 1019 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
SYNRG-217ENST00000612223 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 HSPA2P54652 639 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 IDI1Q13907 227 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 MFSD6Q6ZSS7 791 aa16.67■□□□□ 0.26
SYNRG-217ENST00000612223 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
SYNRG-217ENST00000612223 KIF20AO95235 890 aa16.66■□□□□ 0.26
SYNRG-217ENST00000612223 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
SYNRG-217ENST00000612223 GSTTP1A0A1W2PQM5 241 aa16.66■□□□□ 0.26
SYNRG-217ENST00000612223 LEKR1Q6ZMV7 388 aa16.66■□□□□ 0.26
SYNRG-217ENST00000612223 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
SYNRG-217ENST00000612223 SMARCC1Q92922 1105 aaPredicted RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 DAPK1P53355 1430 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 CETN1Q12798 172 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 TDRD12Q587J7 1177 aaKnown RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 CWC15Q9P013 229 aaKnown RBP16.65■□□□□ 0.26
SYNRG-217ENST00000612223 ANXA1P04083 346 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 CCDC91Q7Z6B0 441 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 BEGAINQ9BUH8 593 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 ACEP12821 1306 aa16.65■□□□□ 0.26
SYNRG-217ENST00000612223 CYP7A1P22680 504 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 CCDC40Q4G0X9 1142 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 ZNF804AQ7Z570 1209 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
SYNRG-217ENST00000612223 STXBP4Q6ZWJ1 553 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
SYNRG-217ENST00000612223 MRPS9P82933 396 aaKnown RBP16.64■□□□□ 0.25
SYNRG-217ENST00000612223 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 HOOK3Q86VS8 718 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 PRKCSHP14314 528 aaPredicted RBP16.63■□□□□ 0.25
SYNRG-217ENST00000612223 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
SYNRG-217ENST00000612223 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 ERLIN1O75477 346 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 SLC39A6Q13433 755 aa16.63■□□□□ 0.25
SYNRG-217ENST00000612223 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
SYNRG-217ENST00000612223 FLIIQ13045 1269 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 TAF12Q16514 161 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 SSX2IPQ9Y2D8 614 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
SYNRG-217ENST00000612223 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 SLC26A6Q9BXS9 759 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 SYNCQ9H7C4 482 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 LMAN1P49257 510 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 AMPD3Q01432 767 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 LRSAM1Q6UWE0 723 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
SYNRG-217ENST00000612223 KIAA0754O94854 1291 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
SYNRG-217ENST00000612223 GOLGA6L7A0A1B0GV03 622 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 TBCAO75347 108 aaKnown RBP16.61■□□□□ 0.25
SYNRG-217ENST00000612223 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
SYNRG-217ENST00000612223 PHACTR2O75167 634 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms