RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 EXOC5O00471 708 aa13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 GNAI3P08754 354 aa13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 UBTFL1P0CB47 393 aaPredicted RBP13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 SYTL4Q96C24 671 aaPredicted RBP13.71□□□□□ -0.22
CSPG4P10-202ENST00000612093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 ASAP1Q9ULH1 1129 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 PXDNLA1KZ92 1463 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 PIGBQ92521 554 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
CSPG4P10-202ENST00000612093 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
CSPG4P10-202ENST00000612093 ANP32BQ92688 251 aaKnown RBP13.69□□□□□ -0.22
CSPG4P10-202ENST00000612093 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
CSPG4P10-202ENST00000612093 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
CSPG4P10-202ENST00000612093 GLI3P10071 1580 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 ESPNB1AK53 854 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 A1BGP04217 495 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 ZGPATQ8N5A5 531 aaKnown RBP13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 GBP4Q96PP9 640 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
CSPG4P10-202ENST00000612093 DDX58O95786 925 aaKnown RBP13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 HMMRO75330 724 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 N4BP2Q86UW6 1770 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 DDB1Q16531 1140 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 NBPF14Q5TI25 921 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
CSPG4P10-202ENST00000612093 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 JCADQ9P266 1359 aa13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 RILPL2Q969X0 211 aa13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P10-202ENST00000612093 MRE11P49959 708 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 ACSBG1Q96GR2 724 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 SLIT2O94813 1529 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 NASPP49321 788 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 MYD88Q99836 296 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 CHMP3Q9Y3E7 222 aa13.65□□□□□ -0.22
CSPG4P10-202ENST00000612093 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.23
CSPG4P10-202ENST00000612093 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 IGKV5-2P06315 115 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 ITGB4P16144 1822 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 PPP1R42Q7Z4L9 355 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
CSPG4P10-202ENST00000612093 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 HSPA1LP34931 641 aa13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
CSPG4P10-202ENST00000612093 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 MSNP26038 577 aaKnown RBP13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 BCL9O00512 1426 aa13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 GRM8O00222 908 aa13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 LRP6O75581 1613 aa13.62□□□□□ -0.23
CSPG4P10-202ENST00000612093 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
CSPG4P10-202ENST00000612093 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
CSPG4P10-202ENST00000612093 PLEKHM2Q8IWE5 1019 aa13.61□□□□□ -0.23
CSPG4P10-202ENST00000612093 UBE2Q2Q8WVN8 375 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms