RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 STARD3NLO95772 234 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 SRGNP10124 158 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 HSPA8P11142 646 aaKnown RBP18.69■□□□□ 0.58
LINC00116-203ENST00000611969 STYK1Q6J9G0 422 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 ABHD8Q96I13 439 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
LINC00116-203ENST00000611969 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
LINC00116-203ENST00000611969 EAPPQ56P03 285 aaPredicted RBP18.68■□□□□ 0.58
LINC00116-203ENST00000611969 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
LINC00116-203ENST00000611969 TTC5Q8N0Z6 440 aa18.67■□□□□ 0.58
LINC00116-203ENST00000611969 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
LINC00116-203ENST00000611969 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 NPHP1O15259 732 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
LINC00116-203ENST00000611969 IL6STP40189 918 aaPredicted RBP18.65■□□□□ 0.58
LINC00116-203ENST00000611969 ST5P78524 1137 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 C7orf43Q8WVR3 580 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 MASTLQ96GX5 879 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
LINC00116-203ENST00000611969 COL4A5P29400 1685 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 TRPM7Q96QT4 1865 aa18.65■□□□□ 0.58
LINC00116-203ENST00000611969 A1BGP04217 495 aa18.64■□□□□ 0.57
LINC00116-203ENST00000611969 CCDC93Q567U6 631 aa18.64■□□□□ 0.57
LINC00116-203ENST00000611969 MAP1SQ66K74 1059 aaPredicted RBP18.64■□□□□ 0.57
LINC00116-203ENST00000611969 HACL1Q9UJ83 578 aa18.64■□□□□ 0.57
LINC00116-203ENST00000611969 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
LINC00116-203ENST00000611969 EPHX2P34913 555 aa18.63■□□□□ 0.57
LINC00116-203ENST00000611969 ZNF790Q6PG37 636 aa18.63■□□□□ 0.57
LINC00116-203ENST00000611969 CLEC11AQ9Y240 323 aa18.63■□□□□ 0.57
LINC00116-203ENST00000611969 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
LINC00116-203ENST00000611969 FKBP4Q02790 459 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC00116-203ENST00000611969 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
LINC00116-203ENST00000611969 SNED1Q8TER0 1413 aa18.61■□□□□ 0.57
LINC00116-203ENST00000611969 DEFB115Q30KQ5 88 aa18.61■□□□□ 0.57
LINC00116-203ENST00000611969 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
LINC00116-203ENST00000611969 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
LINC00116-203ENST00000611969 DZIP3Q86Y13 1208 aaKnown RBP18.6■□□□□ 0.57
LINC00116-203ENST00000611969 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
LINC00116-203ENST00000611969 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
LINC00116-203ENST00000611969 KCNQ3O43525 872 aa18.59■□□□□ 0.57
LINC00116-203ENST00000611969 FMR1Q06787 632 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC00116-203ENST00000611969 TEFQ10587 303 aa18.59■□□□□ 0.57
LINC00116-203ENST00000611969 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
LINC00116-203ENST00000611969 ABT1Q9ULW3 272 aaKnown RBP18.59■□□□□ 0.57
LINC00116-203ENST00000611969 NPR1P16066 1061 aa18.58■□□□□ 0.56
LINC00116-203ENST00000611969 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
LINC00116-203ENST00000611969 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
LINC00116-203ENST00000611969 FZD9O00144 591 aa18.57■□□□□ 0.56
LINC00116-203ENST00000611969 TNRC18O15417 2968 aaPredicted RBP18.57■□□□□ 0.56
LINC00116-203ENST00000611969 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
LINC00116-203ENST00000611969 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
LINC00116-203ENST00000611969 FMNL2Q96PY5 1086 aa18.57■□□□□ 0.56
LINC00116-203ENST00000611969 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
LINC00116-203ENST00000611969 CCDC85CA6NKD9 419 aa18.56■□□□□ 0.56
LINC00116-203ENST00000611969 IARSP41252 1262 aaKnown RBP18.56■□□□□ 0.56
LINC00116-203ENST00000611969 PNMA8AQ86V59 439 aaPredicted RBP18.56■□□□□ 0.56
LINC00116-203ENST00000611969 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
LINC00116-203ENST00000611969 KLRG2A4D1S0 409 aaPredicted RBP18.55■□□□□ 0.56
LINC00116-203ENST00000611969 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
LINC00116-203ENST00000611969 DDX21Q9NR30 783 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC00116-203ENST00000611969 MLLT1Q03111 559 aaPredicted RBP18.54■□□□□ 0.56
LINC00116-203ENST00000611969 GRM1Q13255 1194 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
LINC00116-203ENST00000611969 SLC51AQ86UW1 340 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 GPC2Q8N158 579 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 CAPNS2Q96L46 248 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 TSKSQ9UJT2 592 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
LINC00116-203ENST00000611969 NUP98P52948 1817 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 CYP4F22Q6NT55 531 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
LINC00116-203ENST00000611969 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 SYNE4Q8N205 404 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 ABCC12Q96J65 1359 aa18.53■□□□□ 0.56
LINC00116-203ENST00000611969 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.56
LINC00116-203ENST00000611969 TRAF5O00463 557 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 RGS19P49795 217 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 SCNN1DP51172 638 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC00116-203ENST00000611969 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 GJA3Q9Y6H8 435 aa18.51■□□□□ 0.55
LINC00116-203ENST00000611969 BTBD11A6QL63 1104 aa18.5■□□□□ 0.55
LINC00116-203ENST00000611969 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
LINC00116-203ENST00000611969 NBPF26B4DH59 902 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 AOC2O75106 756 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 EPS15P42566 896 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
LINC00116-203ENST00000611969 CST9Q5W186 159 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 NBPF10Q6P3W6 841 aaKnown RBP18.49■□□□□ 0.55
LINC00116-203ENST00000611969 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 NBPF15Q8N660 670 aa18.49■□□□□ 0.55
LINC00116-203ENST00000611969 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
LINC00116-203ENST00000611969 PSMD1Q99460 953 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms