RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 KDRP35968 1356 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 SF3B2Q13435 895 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 EYA1Q99502 592 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 CEP120Q8N960 986 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 PTPRCP08575 1304 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 GOLGA6L22H0YM25 854 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
PCDHGC3-202ENST00000611950 GLI3P10071 1580 aa12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 A0A0G2JS52 829 aa12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 ESPNB1AK53 854 aa12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-202ENST00000611950 AMPHP49418 695 aa12.96□□□□□ -0.33
PCDHGC3-202ENST00000611950 FKBP5Q13451 457 aaPredicted RBP12.96□□□□□ -0.33
PCDHGC3-202ENST00000611950 SLIT2O94813 1529 aa12.96□□□□□ -0.34
PCDHGC3-202ENST00000611950 RABEP1Q15276 862 aa12.96□□□□□ -0.34
PCDHGC3-202ENST00000611950 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.34
PCDHGC3-202ENST00000611950 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.34
PCDHGC3-202ENST00000611950 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.34
PCDHGC3-202ENST00000611950 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 NEK4P51957 841 aa12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 MTERF4Q7Z6M4 381 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
PCDHGC3-202ENST00000611950 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 MAFGO15525 162 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 NLRP6P59044 892 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 CASC1Q6TDU7 716 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 MPNDQ8N594 471 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
PCDHGC3-202ENST00000611950 PDE1AP54750 535 aa12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 PSME1Q06323 249 aa12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 PALD1Q9ULE6 856 aa12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 ST18O60284 1047 aa12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
PCDHGC3-202ENST00000611950 TNS3Q68CZ2 1445 aa12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 PLCH1Q4KWH8 1693 aa12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 HOXC9P31274 260 aa12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
PCDHGC3-202ENST00000611950 ERC2O15083 957 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 EIF2S2P20042 333 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 VPS72Q15906 364 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 ANXA1P04083 346 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-202ENST00000611950 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 HMMRO75330 724 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 REC8O95072 547 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 TERF1P54274 439 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 FLIIQ13045 1269 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 IL25Q9H293 177 aa12.9□□□□□ -0.34
PCDHGC3-202ENST00000611950 SYCE3A1L190 88 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 GNAI2P04899 355 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 RBSNQ9H1K0 784 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 CGNQ9P2M7 1197 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-202ENST00000611950 FAM208AQ9UK61 1670 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 BAG6P46379 1132 aa12.88□□□□□ -0.35
PCDHGC3-202ENST00000611950 NUCB2P80303 420 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms