RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 AGLP35573 1532 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 SPHKAPQ2M3C7 1700 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 ADAMTS13Q76LX8 1427 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 NPHP1O15259 732 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
SNX13-213ENST00000611725 CCDC85AQ96PX6 553 aaPredicted RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 LETM1O95202 739 aaPredicted RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 CCDC158Q5M9N0 1113 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 LRRC7Q96NW7 1537 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 RBM8AQ9Y5S9 174 aaKnown RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 KIDINS220Q9ULH0 1771 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 HSPA4P34932 840 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 ZSCAN23Q3MJ62 389 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 PIP4K2AP48426 406 aaPredicted RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 PKP1Q13835 747 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
SNX13-213ENST00000611725 SYT1P21579 422 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 AK2P54819 239 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 MPNDQ8N594 471 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 KDRP35968 1356 aa7.58□□□□□ -1.2
SNX13-213ENST00000611725 GOLGA6L19H0YKK7 550 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 CD163L1Q9NR16 1453 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 BRD1O95696 1058 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 CCDC192P0DO97 292 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 FKBP4Q02790 459 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNX13-213ENST00000611725 DDX46Q7L014 1031 aaKnown RBP7.57□□□□□ -1.2
SNX13-213ENST00000611725 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 SDF4Q9BRK5 362 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
SNX13-213ENST00000611725 CPA1P15085 419 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 EAF2Q96CJ1 260 aaPredicted RBP7.57□□□□□ -1.2
SNX13-213ENST00000611725 KIF2CQ99661 725 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
SNX13-213ENST00000611725 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 GAS2L3Q86XJ1 694 aa7.57□□□□□ -1.2
SNX13-213ENST00000611725 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 BRF1Q92994 677 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 DDX11Q96FC9 970 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 HMG20BQ9P0W2 317 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 CTNNA3Q9UI47 895 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 IQGAP1P46940 1657 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 ERBB3P21860 1342 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 GJB2P29033 226 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 PRIM1P49642 420 aaKnown RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 GCKRQ14397 625 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 PROSER3Q2NL68 480 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 DLC1Q96QB1 1528 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 DHX16O60231 1041 aaKnown RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 IFIT1P09914 478 aaKnown RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 FOSBP53539 338 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 NMIQ13287 307 aaPredicted RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 NECAB1Q8N987 351 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 RRAGDQ9NQL2 400 aaPredicted RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 OVOS2A0A0J9YW53 1432 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 OVOS2Q6IE36 1432 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 SYNE3Q6ZMZ3 975 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 SUCLG2Q96I99 432 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 LMBRD1Q9NUN5 540 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
SNX13-213ENST00000611725 LRSAM1Q6UWE0 723 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 CLEC17AQ6ZS10 378 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 NUP62CLQ9H1M0 184 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
SNX13-213ENST00000611725 GOLIM4O00461 696 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 KINO60870 393 aaKnown RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 PRKCSHP14314 528 aaPredicted RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 RASEFQ8IZ41 740 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 R3HCC1Q9Y3T6 440 aaKnown RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 USP16Q9Y5T5 823 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 CCDC34Q96HJ3 373 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 BICC1Q9H694 974 aaKnown RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 CWC25Q9NXE8 425 aaPredicted RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 TMOD3Q9NYL9 352 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 SNX14Q9Y5W7 946 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 CEBPZQ03701 1054 aaKnown RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 MTX1Q13505 466 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 CCDC183Q5T5S1 534 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 KIF6Q6ZMV9 814 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 COL3A1P02461 1466 aaPredicted RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 DEPDC5O75140 1603 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 STARD3NLO95772 234 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 F13A1P00488 732 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 IL15P40933 162 aaPredicted RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 SLC52A2Q9HAB3 445 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 UBE2HP62256 183 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 NEK1Q96PY6 1258 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 METTL22Q9BUU2 404 aaPredicted RBP7.55□□□□□ -1.2
SNX13-213ENST00000611725 DDIT3P35638 169 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 HSPA2P54652 639 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 TRIM5Q9C035 493 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 SSH2Q76I76 1423 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 ANKARQ7Z5J8 1434 aa7.55□□□□□ -1.2
SNX13-213ENST00000611725 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms