RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PI4KAP1Q8N8J0 262 aa20.29■□□□□ 0.84
CLTCL1-207ENST00000611723 A0A087WZG4 1122 aa20.28■□□□□ 0.84
CLTCL1-207ENST00000611723 RLBP1P12271 317 aa20.28■□□□□ 0.84
CLTCL1-207ENST00000611723 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
CLTCL1-207ENST00000611723 PLBD2Q8NHP8 589 aa20.28■□□□□ 0.84
CLTCL1-207ENST00000611723 ADCY9O60503 1353 aa20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 FTSJ3Q8IY81 847 aaKnown RBP20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 CLUAP1Q96AJ1 413 aa20.27■□□□□ 0.84
CLTCL1-207ENST00000611723 C4BP0C0L5 1744 aa20.27■□□□□ 0.83
CLTCL1-207ENST00000611723 ERVV-1B6SEH8 477 aa20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 F6X3S4 739 aa20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 RIC3Q7Z5B4 369 aa20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 FHDC1Q9C0D6 1143 aaPredicted RBP20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
CLTCL1-207ENST00000611723 GNPATO15228 680 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 NEFLP07196 543 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 CCT4P50991 539 aaKnown RBP20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 AK7Q96M32 723 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 MAP3K2Q9Y2U5 619 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 MAP3K15Q6ZN16 1313 aa20.25■□□□□ 0.83
CLTCL1-207ENST00000611723 RGL2O15211 777 aa20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 ADRA2BP18089 450 aa20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 SYT17Q9BSW7 474 aa20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 METTL22Q9BUU2 404 aaPredicted RBP20.24■□□□□ 0.83
CLTCL1-207ENST00000611723 COL15A1P39059 1388 aa20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 MVPQ14764 893 aaKnown RBP20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 BEND3Q5T5X7 828 aa20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 DZIP3Q86Y13 1208 aaKnown RBP20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 ZNF330Q9Y3S2 320 aaPredicted RBP20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
CLTCL1-207ENST00000611723 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 ATP10DQ9P241 1426 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 STK32BQ9NY57 414 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
CLTCL1-207ENST00000611723 CHD4Q14839 1912 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 SSFA2P28290 1259 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 ERICH6BQ5W0A0 696 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
CLTCL1-207ENST00000611723 ALDH1L1O75891 902 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 IRX6P78412 446 aaPredicted RBP20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 LINS1Q8NG48 757 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
CLTCL1-207ENST00000611723 NEXNQ0ZGT2 675 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 HLFQ16534 295 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 CLEC4GQ6UXB4 293 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
CLTCL1-207ENST00000611723 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 ZBTB7BO15156 539 aaPredicted RBP20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 IGKV5-2P06315 115 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 AAMPQ13685 434 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 FKBP8Q14318 412 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 ARXQ96QS3 562 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 ISCA1Q9BUE6 129 aa20.18■□□□□ 0.82
CLTCL1-207ENST00000611723 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
CLTCL1-207ENST00000611723 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
CLTCL1-207ENST00000611723 MYD88Q99836 296 aa20.17■□□□□ 0.82
CLTCL1-207ENST00000611723 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
CLTCL1-207ENST00000611723 NEURL1BA8MQ27 555 aa20.16■□□□□ 0.82
CLTCL1-207ENST00000611723 RFC4P35249 363 aa20.16■□□□□ 0.82
CLTCL1-207ENST00000611723 TFCP2L1Q9NZI6 479 aa20.16■□□□□ 0.82
CLTCL1-207ENST00000611723 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
CLTCL1-207ENST00000611723 ZPR1O75312 459 aa20.15■□□□□ 0.82
CLTCL1-207ENST00000611723 ZNF34Q8IZ26 560 aa20.15■□□□□ 0.82
CLTCL1-207ENST00000611723 CCDC191Q8NCU4 936 aa20.15■□□□□ 0.82
CLTCL1-207ENST00000611723 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
CLTCL1-207ENST00000611723 N4BP2Q86UW6 1770 aaPredicted RBP20.15■□□□□ 0.82
CLTCL1-207ENST00000611723 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
CLTCL1-207ENST00000611723 C1QTNF8P60827 252 aa20.14■□□□□ 0.81
CLTCL1-207ENST00000611723 USP44Q9H0E7 712 aa20.14■□□□□ 0.81
CLTCL1-207ENST00000611723 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
CLTCL1-207ENST00000611723 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
CLTCL1-207ENST00000611723 NUP98P52948 1817 aa20.13■□□□□ 0.81
CLTCL1-207ENST00000611723 PHF14O94880 888 aa20.13■□□□□ 0.81
CLTCL1-207ENST00000611723 GCKRQ14397 625 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms