RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 EYA1Q99502 592 aa9.91□□□□□ -0.82
CLK4-214ENST00000611575 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
CLK4-214ENST00000611575 CNTNAP4Q9C0A0 1308 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 PHF14O94880 888 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 MMP10P09238 476 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 TMF1P82094 1093 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 PDIA6Q15084 440 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 RC3H1Q5TC82 1133 aaKnown RBP9.9□□□□□ -0.82
CLK4-214ENST00000611575 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 ZNF526Q8TF50 670 aaPredicted RBP9.9□□□□□ -0.82
CLK4-214ENST00000611575 SPG7Q9UQ90 795 aa9.9□□□□□ -0.82
CLK4-214ENST00000611575 GNPATO15228 680 aa9.89□□□□□ -0.83
CLK4-214ENST00000611575 GYS1P13807 737 aa9.89□□□□□ -0.83
CLK4-214ENST00000611575 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
CLK4-214ENST00000611575 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
CLK4-214ENST00000611575 JMYQ8N9B5 988 aa9.89□□□□□ -0.83
CLK4-214ENST00000611575 POLKQ9UBT6 870 aa9.89□□□□□ -0.83
CLK4-214ENST00000611575 COL5A3P25940 1745 aaPredicted RBP9.89□□□□□ -0.83
CLK4-214ENST00000611575 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 BRCA1P38398 1863 aaKnown RBP9.88□□□□□ -0.83
CLK4-214ENST00000611575 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
CLK4-214ENST00000611575 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 IFNL2Q8IZJ0 200 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 TMOD3Q9NYL9 352 aa9.88□□□□□ -0.83
CLK4-214ENST00000611575 KDM6AO15550 1401 aaPredicted RBP9.88□□□□□ -0.83
CLK4-214ENST00000611575 KAT6BQ8WYB5 2073 aa9.87□□□□□ -0.83
CLK4-214ENST00000611575 ADAMTS7Q9UKP4 1686 aa9.87□□□□□ -0.83
CLK4-214ENST00000611575 ERVV-2B6SEH9 535 aa9.87□□□□□ -0.83
CLK4-214ENST00000611575 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
CLK4-214ENST00000611575 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
CLK4-214ENST00000611575 A0A0G2JLW4 131 aa9.86□□□□□ -0.83
CLK4-214ENST00000611575 RPS6KA4O75676 772 aa9.86□□□□□ -0.83
CLK4-214ENST00000611575 EIF4A2Q14240 407 aaKnown RBP9.86□□□□□ -0.83
CLK4-214ENST00000611575 DCAF5Q96JK2 942 aa9.86□□□□□ -0.83
CLK4-214ENST00000611575 NMRK2Q9NPI5 230 aa9.86□□□□□ -0.83
CLK4-214ENST00000611575 WWC3Q9ULE0 1092 aa9.86□□□□□ -0.83
CLK4-214ENST00000611575 ZMYND10O75800 440 aa9.85□□□□□ -0.83
CLK4-214ENST00000611575 DPEP1P16444 411 aa9.85□□□□□ -0.83
CLK4-214ENST00000611575 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
CLK4-214ENST00000611575 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
CLK4-214ENST00000611575 RTCBQ9Y3I0 505 aaKnown RBP9.85□□□□□ -0.83
CLK4-214ENST00000611575 FSTL1Q12841 308 aa9.84□□□□□ -0.83
CLK4-214ENST00000611575 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
CLK4-214ENST00000611575 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
CLK4-214ENST00000611575 WDR90Q96KV7 1748 aa9.84□□□□□ -0.83
CLK4-214ENST00000611575 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
CLK4-214ENST00000611575 N4BP2Q86UW6 1770 aaPredicted RBP9.83□□□□□ -0.84
CLK4-214ENST00000611575 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
CLK4-214ENST00000611575 DDR1Q08345 913 aa9.83□□□□□ -0.84
CLK4-214ENST00000611575 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
CLK4-214ENST00000611575 CCDC87Q9NVE4 849 aa9.83□□□□□ -0.84
CLK4-214ENST00000611575 ARFGEF1Q9Y6D6 1849 aa9.83□□□□□ -0.84
CLK4-214ENST00000611575 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
CLK4-214ENST00000611575 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
CLK4-214ENST00000611575 TM4SF1P30408 202 aa9.82□□□□□ -0.84
CLK4-214ENST00000611575 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
CLK4-214ENST00000611575 C9orf131Q5VYM1 1079 aa9.82□□□□□ -0.84
CLK4-214ENST00000611575 TJP1Q07157 1748 aa9.82□□□□□ -0.84
CLK4-214ENST00000611575 KCPQ6ZWJ8 1503 aa9.82□□□□□ -0.84
CLK4-214ENST00000611575 MYH14Q7Z406 1995 aaKnown RBP9.81□□□□□ -0.84
CLK4-214ENST00000611575 MRC1P22897 1456 aa9.81□□□□□ -0.84
CLK4-214ENST00000611575 POLRMTO00411 1230 aaKnown RBP9.81□□□□□ -0.84
CLK4-214ENST00000611575 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
CLK4-214ENST00000611575 INTS5Q6P9B9 1019 aaKnown RBP9.81□□□□□ -0.84
CLK4-214ENST00000611575 ARHGAP27Q6ZUM4 889 aa9.81□□□□□ -0.84
CLK4-214ENST00000611575 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
CLK4-214ENST00000611575 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■■■□□ 14.8
CLK4-214ENST00000611575 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
CLK4-214ENST00000611575 FCHSD2O94868 740 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 RFC4P35249 363 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 CRKLP46109 303 aaKnown RBP9.8□□□□□ -0.84
CLK4-214ENST00000611575 PRELPP51888 382 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 AMOTQ4VCS5 1084 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
CLK4-214ENST00000611575 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
CLK4-214ENST00000611575 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
CLK4-214ENST00000611575 PPM1GO15355 546 aaPredicted RBP9.79□□□□□ -0.84
CLK4-214ENST00000611575 HTRA3P83110 453 aa9.79□□□□□ -0.84
CLK4-214ENST00000611575 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
CLK4-214ENST00000611575 SRP68Q9UHB9 627 aaKnown RBP9.79□□□□□ -0.84
CLK4-214ENST00000611575 TNRC6CQ9HCJ0 1690 aaKnown RBP9.79□□□□□ -0.84
CLK4-214ENST00000611575 PLEKHO1Q53GL0 409 aaPredicted RBP9.78□□□□□ -0.84
CLK4-214ENST00000611575 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
CLK4-214ENST00000611575 TIMELESSQ9UNS1 1208 aa9.78□□□□□ -0.84
CLK4-214ENST00000611575 SOS1Q07889 1333 aaPredicted RBP9.78□□□□□ -0.84
CLK4-214ENST00000611575 KDM2BQ8NHM5 1336 aa9.78□□□□□ -0.84
CLK4-214ENST00000611575 CHRNA5P30532 468 aa9.77□□□□□ -0.85
CLK4-214ENST00000611575 BRPF1P55201 1214 aaPredicted RBP9.77□□□□□ -0.85
CLK4-214ENST00000611575 MAP3K9P80192 1104 aa9.77□□□□□ -0.85
CLK4-214ENST00000611575 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
CLK4-214ENST00000611575 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
CLK4-214ENST00000611575 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
CLK4-214ENST00000611575 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
CLK4-214ENST00000611575 POTECB2RU33 542 aa9.76□□□□□ -0.85
CLK4-214ENST00000611575 IL13P35225 146 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms