RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 KIF6Q6ZMV9 814 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
MUC1-223ENST00000611571 F13A1P00488 732 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 TDO2P48775 406 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 LUZP1Q86V48 1076 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 UBXN4Q92575 508 aa16.23■□□□□ 0.19
MUC1-223ENST00000611571 PTPRTO14522 1441 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 IL13P35225 146 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 METTL24Q5JXM2 366 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 TRIM22Q8IYM9 498 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
MUC1-223ENST00000611571 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
MUC1-223ENST00000611571 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 MPHOSPH8Q99549 860 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 ZSWIM4Q9H7M6 989 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 OFD1O75665 1012 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
MUC1-223ENST00000611571 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
MUC1-223ENST00000611571 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.21■□□□□ 0.19
MUC1-223ENST00000611571 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 XBP1P17861 261 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 POLR3GO15318 223 aaPredicted RBP16.21■□□□□ 0.19
MUC1-223ENST00000611571 PTGS1P23219 599 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 NMIQ13287 307 aaPredicted RBP16.21■□□□□ 0.19
MUC1-223ENST00000611571 HSP90AB3PQ58FF7 597 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 PALD1Q9ULE6 856 aa16.21■□□□□ 0.19
MUC1-223ENST00000611571 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 TMC6Q7Z403 805 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 ANKLE2Q86XL3 938 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 XAGE3Q8WTP9 111 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 PPFIBP1Q86W92 1011 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
MUC1-223ENST00000611571 MICU3Q86XE3 530 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 CTNNA3Q9UI47 895 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
MUC1-223ENST00000611571 CCDC70Q6NSX1 233 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 KIF18AQ8NI77 898 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 ANTXR1Q9H6X2 564 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 NOL10Q9BSC4 688 aaKnown RBP16.19■□□□□ 0.18
MUC1-223ENST00000611571 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 AIDAQ96BJ3 306 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 LRP2BPQ9P2M1 347 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 CCDC47Q96A33 483 aaKnown RBP16.19■□□□□ 0.18
MUC1-223ENST00000611571 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
MUC1-223ENST00000611571 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
MUC1-223ENST00000611571 ORC3Q9UBD5 711 aaPredicted RBP16.19■□□□□ 0.18
MUC1-223ENST00000611571 USP19O94966 1318 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 DYNC1I1O14576 645 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 ANAPC15P60006 121 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 DHX8Q14562 1220 aaKnown RBP16.18■□□□□ 0.18
MUC1-223ENST00000611571 Q6ZUG5 572 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
MUC1-223ENST00000611571 MCM5P33992 734 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 LMBR1LQ6UX01 489 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 GRM8O00222 908 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 CHL1O00533 1208 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
MUC1-223ENST00000611571 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
MUC1-223ENST00000611571 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
MUC1-223ENST00000611571 CGNQ9P2M7 1197 aaKnown RBP16.17■□□□□ 0.18
MUC1-223ENST00000611571 FAM193AP78312 1265 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 ZNF213O14771 459 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 TYRO3Q06418 890 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 FAM227BQ96M60 508 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 SKILP12757 684 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
MUC1-223ENST00000611571 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
MUC1-223ENST00000611571 LGR6Q9HBX8 967 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
MUC1-223ENST00000611571 CCDC129Q6ZRS4 1044 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
MUC1-223ENST00000611571 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
MUC1-223ENST00000611571 ASXL2Q76L83 1435 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 DENND4BO75064 1496 aaPredicted RBP16.15■□□□□ 0.18
MUC1-223ENST00000611571 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 ANKRD24Q8TF21 1146 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
MUC1-223ENST00000611571 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
MUC1-223ENST00000611571 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1579.6 ms