RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 CACNA1FO60840 1977 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 A0A087WZG4 1122 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 NEFMP07197 916 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 MYL6BP14649 208 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 MIER1Q8N108 512 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
SNCA-212ENST00000611107 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
SNCA-212ENST00000611107 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
SNCA-212ENST00000611107 ADCY9O60503 1353 aa11.38□□□□□ -0.59
SNCA-212ENST00000611107 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
SNCA-212ENST00000611107 EIF2S2P20042 333 aaKnown RBP11.37□□□□□ -0.59
SNCA-212ENST00000611107 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
SNCA-212ENST00000611107 GRIN3BO60391 1043 aa11.36□□□□□ -0.59
SNCA-212ENST00000611107 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
SNCA-212ENST00000611107 RASSF7Q02833 373 aa11.34□□□□□ -0.59
SNCA-212ENST00000611107 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
SNCA-212ENST00000611107 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
SNCA-212ENST00000611107 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
SNCA-212ENST00000611107 ANKRD36CQ5JPF3 1778 aa11.33□□□□□ -0.59
SNCA-212ENST00000611107 LMOD3Q0VAK6 560 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNCA-212ENST00000611107 TAF1P21675 1872 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 FER1L6Q2WGJ9 1857 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.6
SNCA-212ENST00000611107 LAMB2P55268 1798 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
SNCA-212ENST00000611107 GPTP24298 496 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
SNCA-212ENST00000611107 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 CLEC4GQ6UXB4 293 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 TSPYL6Q8N831 410 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
SNCA-212ENST00000611107 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
SNCA-212ENST00000611107 COL4A1P02462 1669 aa11.32□□□□□ -0.6
SNCA-212ENST00000611107 DUSP27Q5VZP5 1158 aa11.31□□□□□ -0.6
SNCA-212ENST00000611107 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
SNCA-212ENST00000611107 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
SNCA-212ENST00000611107 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
SNCA-212ENST00000611107 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
SNCA-212ENST00000611107 BRIP1Q9BX63 1249 aa11.31□□□□□ -0.6
SNCA-212ENST00000611107 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
SNCA-212ENST00000611107 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
SNCA-212ENST00000611107 NFKBIEO00221 500 aa11.3□□□□□ -0.6
SNCA-212ENST00000611107 SRGNP10124 158 aa11.3□□□□□ -0.6
SNCA-212ENST00000611107 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
SNCA-212ENST00000611107 ERFEQ4G0M1 354 aa11.3□□□□□ -0.6
SNCA-212ENST00000611107 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
SNCA-212ENST00000611107 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
SNCA-212ENST00000611107 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
SNCA-212ENST00000611107 ZNF622Q969S3 477 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNCA-212ENST00000611107 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
SNCA-212ENST00000611107 ERVV-1B6SEH8 477 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 H0YIN7 160 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
SNCA-212ENST00000611107 NTSR2O95665 410 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
SNCA-212ENST00000611107 TTLL6Q8N841 843 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
SNCA-212ENST00000611107 IFT57Q9NWB7 429 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 ERBB4Q15303 1308 aa11.29□□□□□ -0.6
SNCA-212ENST00000611107 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
SNCA-212ENST00000611107 C21orf2O43822 256 aa11.28□□□□□ -0.6
SNCA-212ENST00000611107 HDGFL1Q5TGJ6 251 aa11.28□□□□□ -0.6
SNCA-212ENST00000611107 C7orf43Q8WVR3 580 aa11.28□□□□□ -0.6
SNCA-212ENST00000611107 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNCA-212ENST00000611107 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
SNCA-212ENST00000611107 RGL2O15211 777 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 PDE6BP35913 854 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.61
SNCA-212ENST00000611107 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
SNCA-212ENST00000611107 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
SNCA-212ENST00000611107 KIF3CO14782 793 aa11.26□□□□□ -0.61
SNCA-212ENST00000611107 ST5P78524 1137 aa11.26□□□□□ -0.61
SNCA-212ENST00000611107 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
SNCA-212ENST00000611107 PRPF40BQ6NWY9 871 aaKnown RBP11.26□□□□□ -0.61
SNCA-212ENST00000611107 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
SNCA-212ENST00000611107 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
SNCA-212ENST00000611107 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms