RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 NECTIN2Q92692 538 aa23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 NEK4P51957 841 aa23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 CUL4AQ13619 759 aa23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 LARP1Q6PKG0 1096 aaKnown RBP23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
SEMA3B-210ENST00000611067 RNF214Q8ND24 703 aa23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 DCAF5Q96JK2 942 aa23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 CYP27B1O15528 508 aa23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 KCNQ3O43525 872 aa23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 SYAP1Q96A49 352 aaPredicted RBP23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 COL14A1Q05707 1796 aaKnown RBP23.07■■□□□ 1.28
SEMA3B-210ENST00000611067 APBB1O00213 710 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 IL2RBP14784 551 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 FOXD4L5Q5VV16 416 aaPredicted RBP23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 G2E3Q7L622 706 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 FOXD4L4Q8WXT5 416 aaPredicted RBP23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 PRDM4Q9UKN5 801 aa23.06■■□□□ 1.28
SEMA3B-210ENST00000611067 PCDH11XQ9BZA7 1347 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 PCDH11YQ9BZA8 1340 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 PIP4K2BP78356 416 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 INTS4Q96HW7 963 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 KIAA2012Q0VF49 1180 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 FLIIQ13045 1269 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 MEIS3Q99687 375 aa23.05■■□□□ 1.28
SEMA3B-210ENST00000611067 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
SEMA3B-210ENST00000611067 HMMRO75330 724 aa23.04■■□□□ 1.28
SEMA3B-210ENST00000611067 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
SEMA3B-210ENST00000611067 PDE1AP54750 535 aa23.04■■□□□ 1.28
SEMA3B-210ENST00000611067 PTMAP06454 111 aaKnown RBP23.03■■□□□ 1.28
SEMA3B-210ENST00000611067 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
SEMA3B-210ENST00000611067 PHF14O94880 888 aa23.02■■□□□ 1.28
SEMA3B-210ENST00000611067 SMAP1Q8IYB5 467 aaPredicted RBP23.02■■□□□ 1.28
SEMA3B-210ENST00000611067 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
SEMA3B-210ENST00000611067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.02■■□□□ 1.28
SEMA3B-210ENST00000611067 MRC1P22897 1456 aa23.02■■□□□ 1.28
SEMA3B-210ENST00000611067 MCCP23508 829 aa23.01■■□□□ 1.27
SEMA3B-210ENST00000611067 ANAPC15P60006 121 aa23.01■■□□□ 1.27
SEMA3B-210ENST00000611067 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
SEMA3B-210ENST00000611067 ZNF790Q6PG37 636 aa23■■□□□ 1.27
SEMA3B-210ENST00000611067 ESYT1Q9BSJ8 1104 aa23■■□□□ 1.27
SEMA3B-210ENST00000611067 CCT4P50991 539 aaKnown RBP22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 UVSSAQ2YD98 709 aa22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 FAM184AQ8NB25 1140 aa22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 F6X3S4 739 aa22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 GIGYF1O75420 1035 aaPredicted RBP22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 MYRIPQ8NFW9 859 aa22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
SEMA3B-210ENST00000611067 CABP4P57796 275 aa22.98■■□□□ 1.27
SEMA3B-210ENST00000611067 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
SEMA3B-210ENST00000611067 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
SEMA3B-210ENST00000611067 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
SEMA3B-210ENST00000611067 TTC5Q8N0Z6 440 aa22.97■■□□□ 1.27
SEMA3B-210ENST00000611067 IL17RAQ96F46 866 aa22.97■■□□□ 1.27
SEMA3B-210ENST00000611067 TUBGCP6Q96RT7 1819 aa22.97■■□□□ 1.27
SEMA3B-210ENST00000611067 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 PRIMPOLQ96LW4 560 aa22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 PALD1Q9ULE6 856 aa22.96■■□□□ 1.27
SEMA3B-210ENST00000611067 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
SEMA3B-210ENST00000611067 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
SEMA3B-210ENST00000611067 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
SEMA3B-210ENST00000611067 CCDC94Q9BW85 323 aaPredicted RBP22.94■■□□□ 1.26
SEMA3B-210ENST00000611067 PXDNLA1KZ92 1463 aa22.94■■□□□ 1.26
SEMA3B-210ENST00000611067 WDR33Q9C0J8 1336 aaKnown RBP22.94■■□□□ 1.26
SEMA3B-210ENST00000611067 GADD45BO75293 160 aaPredicted RBP22.93■■□□□ 1.26
SEMA3B-210ENST00000611067 DNTTIP2Q5QJE6 756 aaKnown RBP22.93■■□□□ 1.26
SEMA3B-210ENST00000611067 PLCH1Q4KWH8 1693 aa22.93■■□□□ 1.26
SEMA3B-210ENST00000611067 HMGN5P82970 282 aaKnown RBP22.93■■□□□ 1.26
SEMA3B-210ENST00000611067 USP48Q86UV5 1035 aa22.93■■□□□ 1.26
SEMA3B-210ENST00000611067 NKX1-1Q15270 411 aaPredicted RBP22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 TMEM87AQ8NBN3 555 aa22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 PRAMEF22A3QJZ6 481 aa22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 CHMLP26374 656 aa22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 GTF2F1P35269 517 aaKnown RBP eCLIP22.92■■□□□ 1.261e-7■□□□□ 9.8
SEMA3B-210ENST00000611067 ANO2Q9NQ90 1003 aa22.92■■□□□ 1.26
SEMA3B-210ENST00000611067 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 NOLC1Q14978 699 aaKnown RBP eCLIP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 NOL8Q76FK4 1167 aaKnown RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 FMNL2Q96PY5 1086 aa22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 GDPD2Q9HCC8 539 aa22.91■■□□□ 1.26
SEMA3B-210ENST00000611067 MX1P20591 662 aa22.9■■□□□ 1.26
SEMA3B-210ENST00000611067 CCDC183Q5T5S1 534 aa22.9■■□□□ 1.26
SEMA3B-210ENST00000611067 EPB41L2O43491 1005 aaKnown RBP22.89■■□□□ 1.26
SEMA3B-210ENST00000611067 ANXA1P04083 346 aa22.89■■□□□ 1.26
SEMA3B-210ENST00000611067 LRRCC1Q9C099 1032 aa22.89■■□□□ 1.26
SEMA3B-210ENST00000611067 EXOC6BQ9Y2D4 811 aa22.89■■□□□ 1.26
SEMA3B-210ENST00000611067 TCHHQ07283 1943 aa22.89■■□□□ 1.26
SEMA3B-210ENST00000611067 C5P01031 1676 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms