RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
TNIP1-221ENST00000610874 GNAI3P08754 354 aa21.5■■□□□ 1.03
TNIP1-221ENST00000610874 UBTFL1P0CB47 393 aaPredicted RBP21.5■■□□□ 1.03
TNIP1-221ENST00000610874 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
TNIP1-221ENST00000610874 DNAAF4Q8WXU2 420 aa21.49■■□□□ 1.03
TNIP1-221ENST00000610874 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
TNIP1-221ENST00000610874 CAMTA1Q9Y6Y1 1673 aa21.49■■□□□ 1.03
TNIP1-221ENST00000610874 MYL6BP14649 208 aa21.49■■□□□ 1.03
TNIP1-221ENST00000610874 MCCP23508 829 aa21.49■■□□□ 1.03
TNIP1-221ENST00000610874 LRRCC1Q9C099 1032 aa21.49■■□□□ 1.03
TNIP1-221ENST00000610874 HOXB7P09629 217 aa21.48■■□□□ 1.03
TNIP1-221ENST00000610874 MX1P20591 662 aa21.48■■□□□ 1.03
TNIP1-221ENST00000610874 MBD3O95983 291 aa21.48■■□□□ 1.03
TNIP1-221ENST00000610874 RBM10P98175 930 aaKnown RBP21.48■■□□□ 1.03
TNIP1-221ENST00000610874 BRD1O95696 1058 aa21.47■■□□□ 1.03
TNIP1-221ENST00000610874 ZNF496Q96IT1 587 aaPredicted RBP21.47■■□□□ 1.03
TNIP1-221ENST00000610874 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
TNIP1-221ENST00000610874 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
TNIP1-221ENST00000610874 MCM2P49736 904 aa21.47■■□□□ 1.03
TNIP1-221ENST00000610874 ZKSCAN5Q9Y2L8 839 aa21.47■■□□□ 1.03
TNIP1-221ENST00000610874 CPDO75976 1380 aa21.47■■□□□ 1.03
TNIP1-221ENST00000610874 BEND3Q5T5X7 828 aa21.46■■□□□ 1.03
TNIP1-221ENST00000610874 ADCY9O60503 1353 aa21.46■■□□□ 1.03
TNIP1-221ENST00000610874 ZNF500O60304 480 aaPredicted RBP21.46■■□□□ 1.03
TNIP1-221ENST00000610874 LARP1Q6PKG0 1096 aaKnown RBP21.46■■□□□ 1.03
TNIP1-221ENST00000610874 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
TNIP1-221ENST00000610874 DDX54Q8TDD1 881 aaKnown RBP21.45■■□□□ 1.02
TNIP1-221ENST00000610874 GDPD2Q9HCC8 539 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 CHMLP26374 656 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 PDCL3Q9H2J4 239 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 SALL3Q9BXA9 1300 aa21.45■■□□□ 1.02
TNIP1-221ENST00000610874 CUL4AQ13619 759 aa21.44■■□□□ 1.02
TNIP1-221ENST00000610874 ZMYND15Q9H091 742 aa21.44■■□□□ 1.02
TNIP1-221ENST00000610874 EVA1CP58658 441 aa21.44■■□□□ 1.02
TNIP1-221ENST00000610874 WDR17Q8IZU2 1322 aa21.44■■□□□ 1.02
TNIP1-221ENST00000610874 CRYBG1Q9Y4K1 1723 aa21.44■■□□□ 1.02
TNIP1-221ENST00000610874 DCAF5Q96JK2 942 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 USP16Q9Y5T5 823 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 CABP4P57796 275 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
TNIP1-221ENST00000610874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.021e-7■■■□□ 17.7
TNIP1-221ENST00000610874 PDIA6Q15084 440 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 TTC5Q8N0Z6 440 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 IL1RAPL2Q9NP60 686 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 FAM13BQ9NYF5 915 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 CCDC39Q9UFE4 941 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 TPRNQ4KMQ1 711 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
TNIP1-221ENST00000610874 PTMAP06454 111 aaKnown RBP21.41■■□□□ 1.02
TNIP1-221ENST00000610874 OVOS2A0A0G2JMS6 1433 aa21.41■■□□□ 1.02
TNIP1-221ENST00000610874 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
TNIP1-221ENST00000610874 ZCRB1Q8TBF4 217 aaKnown RBP21.41■■□□□ 1.02
TNIP1-221ENST00000610874 INTS4Q96HW7 963 aaKnown RBP21.41■■□□□ 1.02
TNIP1-221ENST00000610874 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
TNIP1-221ENST00000610874 TERF1P54274 439 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 ANAPC15P60006 121 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 UQCRHLA0A096LP55 91 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 UQCRHP07919 91 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 IL25Q9H293 177 aa21.4■■□□□ 1.02
TNIP1-221ENST00000610874 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.01
TNIP1-221ENST00000610874 C9orf78Q9NZ63 289 aaPredicted RBP21.39■■□□□ 1.01
TNIP1-221ENST00000610874 SURF6O75683 361 aaKnown RBP21.39■■□□□ 1.01
TNIP1-221ENST00000610874 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
TNIP1-221ENST00000610874 SYAP1Q96A49 352 aaPredicted RBP21.39■■□□□ 1.01
TNIP1-221ENST00000610874 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
TNIP1-221ENST00000610874 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
TNIP1-221ENST00000610874 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
TNIP1-221ENST00000610874 HYPKQ9NX55 129 aa21.38■■□□□ 1.01
TNIP1-221ENST00000610874 TUBGCP6Q96RT7 1819 aa21.38■■□□□ 1.01
TNIP1-221ENST00000610874 XAGE3Q8WTP9 111 aa21.38■■□□□ 1.01
TNIP1-221ENST00000610874 PXDNLA1KZ92 1463 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 NUTM1Q86Y26 1132 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 PKNOX2Q96KN3 472 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 MCM5P33992 734 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 USP48Q86UV5 1035 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 MPNDQ8N594 471 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 JARID2Q92833 1246 aaPredicted RBP21.37■■□□□ 1.01
TNIP1-221ENST00000610874 BTG4Q9NY30 223 aa21.37■■□□□ 1.01
TNIP1-221ENST00000610874 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
TNIP1-221ENST00000610874 TCHHQ07283 1943 aa21.36■■□□□ 1.01
TNIP1-221ENST00000610874 IL2RBP14784 551 aa21.36■■□□□ 1.01
TNIP1-221ENST00000610874 SSH3Q8TE77 659 aa21.35■■□□□ 1.01
TNIP1-221ENST00000610874 STAP2Q9UGK3 403 aa21.35■■□□□ 1.01
TNIP1-221ENST00000610874 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
TNIP1-221ENST00000610874 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
TNIP1-221ENST00000610874 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
TNIP1-221ENST00000610874 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
TNIP1-221ENST00000610874 LARP6Q9BRS8 491 aaKnown RBP21.34■■□□□ 1.01
TNIP1-221ENST00000610874 CARD10Q9BWT7 1032 aa21.33■■□□□ 1.01
TNIP1-221ENST00000610874 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
TNIP1-221ENST00000610874 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms