RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
NEK3-205ENST00000610828 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
NEK3-205ENST00000610828 IL2RBP14784 551 aa16.64■□□□□ 0.25
NEK3-205ENST00000610828 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
NEK3-205ENST00000610828 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
NEK3-205ENST00000610828 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
NEK3-205ENST00000610828 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
NEK3-205ENST00000610828 ST18O60284 1047 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 EVA1CP58658 441 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 GCKRQ14397 625 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
NEK3-205ENST00000610828 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
NEK3-205ENST00000610828 MCCP23508 829 aa16.61■□□□□ 0.25
NEK3-205ENST00000610828 CNTROBQ8N137 903 aa16.61■□□□□ 0.25
NEK3-205ENST00000610828 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
NEK3-205ENST00000610828 ERVV-2B6SEH9 535 aa16.6■□□□□ 0.25
NEK3-205ENST00000610828 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
NEK3-205ENST00000610828 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
NEK3-205ENST00000610828 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEK3-205ENST00000610828 TNPO1Q92973 898 aaKnown RBP16.6■□□□□ 0.25
NEK3-205ENST00000610828 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
NEK3-205ENST00000610828 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
NEK3-205ENST00000610828 SIL1Q9H173 461 aa16.59■□□□□ 0.25
NEK3-205ENST00000610828 IL25Q9H293 177 aa16.59■□□□□ 0.25
NEK3-205ENST00000610828 USP42Q9H9J4 1324 aaKnown RBP16.59■□□□□ 0.25
NEK3-205ENST00000610828 GLI3P10071 1580 aa16.59■□□□□ 0.25
NEK3-205ENST00000610828 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.25
NEK3-205ENST00000610828 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.25
NEK3-205ENST00000610828 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.25
NEK3-205ENST00000610828 AACSQ86V21 672 aa16.58■□□□□ 0.25
NEK3-205ENST00000610828 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.25
NEK3-205ENST00000610828 GPATCH3Q96I76 525 aa16.58■□□□□ 0.25
NEK3-205ENST00000610828 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.25
NEK3-205ENST00000610828 LAMB4A4D0S4 1761 aa16.58■□□□□ 0.24
NEK3-205ENST00000610828 SASH1O94885 1247 aa16.58■□□□□ 0.24
NEK3-205ENST00000610828 NEK4P51957 841 aa16.58■□□□□ 0.24
NEK3-205ENST00000610828 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
NEK3-205ENST00000610828 KLHDC4Q8TBB5 520 aa16.58■□□□□ 0.24
NEK3-205ENST00000610828 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
NEK3-205ENST00000610828 EPHA10Q5JZY3 1008 aa16.57■□□□□ 0.24
NEK3-205ENST00000610828 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
NEK3-205ENST00000610828 PLBD2Q8NHP8 589 aa16.57■□□□□ 0.24
NEK3-205ENST00000610828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
NEK3-205ENST00000610828 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
NEK3-205ENST00000610828 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
NEK3-205ENST00000610828 DDX11L8A8MPP1 907 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
NEK3-205ENST00000610828 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 ANAPC15P60006 121 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
NEK3-205ENST00000610828 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
NEK3-205ENST00000610828 A0A087WZG4 1122 aa16.55■□□□□ 0.24
NEK3-205ENST00000610828 SGSM2O43147 1006 aa16.55■□□□□ 0.24
NEK3-205ENST00000610828 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
NEK3-205ENST00000610828 EAF2Q96CJ1 260 aaPredicted RBP16.55■□□□□ 0.24
NEK3-205ENST00000610828 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
NEK3-205ENST00000610828 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
NEK3-205ENST00000610828 BTG4Q9NY30 223 aa16.55■□□□□ 0.24
NEK3-205ENST00000610828 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
NEK3-205ENST00000610828 A1BGP04217 495 aa16.54■□□□□ 0.24
NEK3-205ENST00000610828 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
NEK3-205ENST00000610828 TRAK2O60296 914 aa16.53■□□□□ 0.24
NEK3-205ENST00000610828 SSFA2P28290 1259 aa16.53■□□□□ 0.24
NEK3-205ENST00000610828 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
NEK3-205ENST00000610828 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
NEK3-205ENST00000610828 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
NEK3-205ENST00000610828 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
NEK3-205ENST00000610828 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
NEK3-205ENST00000610828 RAD50Q92878 1312 aa16.52■□□□□ 0.24
NEK3-205ENST00000610828 HSPA4P34932 840 aa16.52■□□□□ 0.23
NEK3-205ENST00000610828 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.23
NEK3-205ENST00000610828 ZGPATQ8N5A5 531 aaKnown RBP16.52■□□□□ 0.23
NEK3-205ENST00000610828 GZF1Q9H116 711 aaPredicted RBP16.52■□□□□ 0.23
NEK3-205ENST00000610828 PAPPAQ13219 1627 aa16.52■□□□□ 0.23
NEK3-205ENST00000610828 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
NEK3-205ENST00000610828 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
NEK3-205ENST00000610828 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
NEK3-205ENST00000610828 MCM2P49736 904 aa16.51■□□□□ 0.23
NEK3-205ENST00000610828 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
NEK3-205ENST00000610828 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
NEK3-205ENST00000610828 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
NEK3-205ENST00000610828 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
NEK3-205ENST00000610828 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
NEK3-205ENST00000610828 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
NEK3-205ENST00000610828 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
NEK3-205ENST00000610828 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
NEK3-205ENST00000610828 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
NEK3-205ENST00000610828 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
NEK3-205ENST00000610828 CASP7P55210 303 aa16.5■□□□□ 0.23
NEK3-205ENST00000610828 NUCB2P80303 420 aa16.5■□□□□ 0.23
NEK3-205ENST00000610828 COL15A1P39059 1388 aa16.49■□□□□ 0.23
NEK3-205ENST00000610828 IL17RAQ96F46 866 aa16.49■□□□□ 0.23
NEK3-205ENST00000610828 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
NEK3-205ENST00000610828 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
NEK3-205ENST00000610828 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
NEK3-205ENST00000610828 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms