RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 MEGF6O75095 1541 aa9.56□□□□□ -0.88
LMBR1-221ENST00000609774 RGPD2P0DJD1 1756 aa9.56□□□□□ -0.88
LMBR1-221ENST00000609774 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-221ENST00000609774 FSTL1Q12841 308 aa9.56□□□□□ -0.88
LMBR1-221ENST00000609774 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-221ENST00000609774 RTL1A6NKG5 1358 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 ITGB4P16144 1822 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 SSFA2P28290 1259 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 TGFB2P61812 414 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 ZNF526Q8TF50 670 aaPredicted RBP9.55□□□□□ -0.88
LMBR1-221ENST00000609774 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 MYH16Q9H6N6 1097 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 BOLA1Q9Y3E2 137 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 ZNF831Q5JPB2 1677 aa9.55□□□□□ -0.88
LMBR1-221ENST00000609774 PXDNLA1KZ92 1463 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 PALLDQ8WX93 1383 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 GLIPR1L2Q4G1C9 344 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 MSL1Q68DK7 614 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 CCDC146Q8IYE0 955 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 SYTL4Q96C24 671 aaPredicted RBP9.54□□□□□ -0.88
LMBR1-221ENST00000609774 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
LMBR1-221ENST00000609774 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
LMBR1-221ENST00000609774 HOXC9P31274 260 aa9.53□□□□□ -0.88
LMBR1-221ENST00000609774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.53□□□□□ -0.88
LMBR1-221ENST00000609774 SMARCC1Q92922 1105 aaPredicted RBP9.53□□□□□ -0.88
LMBR1-221ENST00000609774 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
LMBR1-221ENST00000609774 MAP3K19Q56UN5 1328 aa9.53□□□□□ -0.88
LMBR1-221ENST00000609774 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.88
LMBR1-221ENST00000609774 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 BCAR3O75815 825 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-221ENST00000609774 PKD1L3Q7Z443 1732 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-221ENST00000609774 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 UBE2Q2Q8WVN8 375 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
LMBR1-221ENST00000609774 TERF2IPQ9NYB0 399 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 CHMP5Q9NZZ3 219 aa9.52□□□□□ -0.89
LMBR1-221ENST00000609774 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
LMBR1-221ENST00000609774 A0A1W2PP64 1363 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
LMBR1-221ENST00000609774 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 IGHDP01880 384 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 MORC1Q86VD1 984 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
LMBR1-221ENST00000609774 N4BP2Q86UW6 1770 aaPredicted RBP9.5□□□□□ -0.89
LMBR1-221ENST00000609774 SLC34A2O95436 690 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
LMBR1-221ENST00000609774 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 AK7Q96M32 723 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
LMBR1-221ENST00000609774 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 SBF1O95248 1867 aa9.5□□□□□ -0.89
LMBR1-221ENST00000609774 PCNTO95613 3336 aa9.49□□□□□ -0.89
LMBR1-221ENST00000609774 MRE11P49959 708 aa9.49□□□□□ -0.89
LMBR1-221ENST00000609774 ZKSCAN2Q63HK3 967 aa9.49□□□□□ -0.89
LMBR1-221ENST00000609774 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
LMBR1-221ENST00000609774 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
LMBR1-221ENST00000609774 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
LMBR1-221ENST00000609774 CYP27B1O15528 508 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 SKOR2Q2VWA4 1001 aaPredicted RBP9.48□□□□□ -0.89
LMBR1-221ENST00000609774 FTSJ3Q8IY81 847 aaKnown RBP9.48□□□□□ -0.89
LMBR1-221ENST00000609774 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 PANK1Q8TE04 598 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
LMBR1-221ENST00000609774 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 C4AP0C0L4 1744 aa9.48□□□□□ -0.89
LMBR1-221ENST00000609774 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-221ENST00000609774 KCNA3P22001 575 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 MCM4P33991 863 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 AMPHP49418 695 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 SIK1P57059 783 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
LMBR1-221ENST00000609774 PIGBQ92521 554 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 COG3Q96JB2 828 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 MS4A4AQ96JQ5 239 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-221ENST00000609774 DDX19BQ9UMR2 479 aa9.47□□□□□ -0.89
LMBR1-221ENST00000609774 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-221ENST00000609774 IPO8O15397 1037 aaKnown RBP9.46□□□□□ -0.9
LMBR1-221ENST00000609774 MMP10P09238 476 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms