RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.26
PCDHB16-201ENST00000609684 PPP1R1BQ9UD71 204 aaPredicted RBP16.64■□□□□ 0.26
PCDHB16-201ENST00000609684 ATP8B2P98198 1209 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 FLT4P35916 1363 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 ABCC1P33527 1531 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
PCDHB16-201ENST00000609684 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 HAND2P61296 217 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 TEX14Q8IWB6 1497 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 ESYT1Q9BSJ8 1104 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
PCDHB16-201ENST00000609684 POLR3DP05423 398 aaPredicted RBP16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 ANKIB1Q9P2G1 1089 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 GRM8O00222 908 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 PPFIA3O75145 1194 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
PCDHB16-201ENST00000609684 SYCP1Q15431 976 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 KSR2Q6VAB6 950 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 LUC7LQ9NQ29 371 aaKnown RBP16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 FSIP1Q8NA03 581 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 ADGRL2O95490 1459 aa16.61■□□□□ 0.25
PCDHB16-201ENST00000609684 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 EYA1Q99502 592 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
PCDHB16-201ENST00000609684 CTAGE5O15320 804 aa16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 SSRP1Q08945 709 aaKnown RBP16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 BRF1Q92994 677 aa16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
PCDHB16-201ENST00000609684 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.25
PCDHB16-201ENST00000609684 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.25
PCDHB16-201ENST00000609684 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.25
PCDHB16-201ENST00000609684 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 MICU3Q86XE3 530 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 CCDC144CPQ8IYA2 1237 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 ANAPC15P60006 121 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 CCDC181Q5TID7 509 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 UBE2HP62256 183 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 MYO6Q9UM54 1294 aa16.58■□□□□ 0.24
PCDHB16-201ENST00000609684 ZNF76P36508 570 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 ARHGAP29Q52LW3 1261 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 AXDND1Q5T1B0 1012 aaPredicted RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 SNX21Q969T3 373 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 NCOA7Q8NI08 942 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
PCDHB16-201ENST00000609684 CNNM3Q8NE01 707 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 MAST1Q9Y2H9 1570 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms