RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IQSEC3Q9UPP2 1182 aaPredicted RBP8.41□□□□□ -1.06
SMCHD1-213ENST00000609587 M0R082 166 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 SEMA3FQ13275 785 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 LRP8Q14114 963 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 ZNF417Q8TAU3 575 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 ZNF587Q96SQ5 575 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.06
SMCHD1-213ENST00000609587 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
SMCHD1-213ENST00000609587 ALBP02768 609 aa8.39□□□□□ -1.07
SMCHD1-213ENST00000609587 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
SMCHD1-213ENST00000609587 ALG2Q9H553 416 aa8.39□□□□□ -1.07
SMCHD1-213ENST00000609587 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
SMCHD1-213ENST00000609587 BTBD11A6QL63 1104 aa8.38□□□□□ -1.07
SMCHD1-213ENST00000609587 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
SMCHD1-213ENST00000609587 GRIK4Q16099 956 aa8.38□□□□□ -1.07
SMCHD1-213ENST00000609587 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
SMCHD1-213ENST00000609587 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
SMCHD1-213ENST00000609587 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 SIN3BO75182 1162 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 NID1P14543 1247 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
SMCHD1-213ENST00000609587 TMEM229AB2RXF0 380 aa8.36□□□□□ -1.07
SMCHD1-213ENST00000609587 ALAS2P22557 587 aa8.36□□□□□ -1.07
SMCHD1-213ENST00000609587 MTFR1Q15390 333 aa8.36□□□□□ -1.07
SMCHD1-213ENST00000609587 C1orf115Q9H7X2 142 aa8.36□□□□□ -1.07
SMCHD1-213ENST00000609587 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
SMCHD1-213ENST00000609587 H2AFB2P0C5Z0 115 aa8.35□□□□□ -1.07
SMCHD1-213ENST00000609587 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
SMCHD1-213ENST00000609587 SLC4A9Q96Q91 983 aa8.35□□□□□ -1.07
SMCHD1-213ENST00000609587 A6NJY4 79 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 POM121CA8CG34 1229 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 CDK2AP1O14519 115 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 TXLNAP40222 546 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 MICALL1Q8N3F8 863 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 SLC30A3Q99726 388 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 PARP3Q9Y6F1 533 aa8.34□□□□□ -1.07
SMCHD1-213ENST00000609587 HYAL3O43820 417 aaPredicted RBP8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 BICDL1Q6ZP65 573 aa8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
SMCHD1-213ENST00000609587 ADH7P40394 386 aa8.32□□□□□ -1.08
SMCHD1-213ENST00000609587 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
SMCHD1-213ENST00000609587 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
SMCHD1-213ENST00000609587 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
SMCHD1-213ENST00000609587 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
SMCHD1-213ENST00000609587 SELPP16109 830 aa8.31□□□□□ -1.08
SMCHD1-213ENST00000609587 HDGFL1Q5TGJ6 251 aa8.31□□□□□ -1.08
SMCHD1-213ENST00000609587 ARID3AQ99856 593 aa8.31□□□□□ -1.08
SMCHD1-213ENST00000609587 LRRC69Q6ZNQ3 347 aa8.3□□□□□ -1.08
SMCHD1-213ENST00000609587 C20orf204Q6ZNR8 217 aa8.3□□□□□ -1.08
SMCHD1-213ENST00000609587 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
SMCHD1-213ENST00000609587 PIK3CDO00329 1044 aa8.29□□□□□ -1.08
SMCHD1-213ENST00000609587 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-213ENST00000609587 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-213ENST00000609587 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
SMCHD1-213ENST00000609587 C9orf172C9J069 976 aa8.28□□□□□ -1.08
SMCHD1-213ENST00000609587 LZTS3O60299 673 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-213ENST00000609587 CCDC82Q8N4S0 544 aa8.28□□□□□ -1.08
SMCHD1-213ENST00000609587 EML1O00423 815 aa8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 ELNP15502 786 aa8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 GLMNQ92990 594 aa8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-213ENST00000609587 A0A0A0MRY4 1105 aa8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 SKIP12755 728 aa8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 SSBP4Q9BWG4 385 aaPredicted RBP8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 SERPINA10Q9UK55 444 aa8.26□□□□□ -1.09
SMCHD1-213ENST00000609587 L3MBTL2Q969R5 705 aa8.25□□□□□ -1.09
SMCHD1-213ENST00000609587 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
SMCHD1-213ENST00000609587 LENG1Q96BZ8 264 aaPredicted RBP8.25□□□□□ -1.09
SMCHD1-213ENST00000609587 PCDHGA11Q9Y5H2 935 aa8.25□□□□□ -1.09
SMCHD1-213ENST00000609587 TRAPPC3LQ5T215 181 aa8.24□□□□□ -1.09
SMCHD1-213ENST00000609587 MCTP1Q6DN14 999 aa8.24□□□□□ -1.09
SMCHD1-213ENST00000609587 ARXQ96QS3 562 aa8.24□□□□□ -1.09
SMCHD1-213ENST00000609587 USP17L5A8MUK1 530 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 ATP9BO43861 1147 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 LILRB5O75023 590 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 EPHA4P54764 986 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 TEAD4Q15561 434 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 EML3Q32P44 896 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 SH3PXD2AQ5TCZ1 1133 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 PLEKHM2Q8IWE5 1019 aa8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 GPC6Q9Y625 555 aaPredicted RBP8.23□□□□□ -1.09
SMCHD1-213ENST00000609587 NRG1Q02297 640 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-213ENST00000609587 NCOA4Q13772 614 aa8.21□□□□□ -1.1
SMCHD1-213ENST00000609587 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1273.1 ms