RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CFAP74Q9C0B2 1584 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 REREQ9P2R6 1566 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 MROH2AA6NES4 1674 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 MUM1L1Q5H9M0 696 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SUGP1Q8IWZ8 645 aaKnown RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 TEKT1Q969V4 418 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 ARHGEF10LQ9HCE6 1279 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SETD1AO15047 1707 aaKnown RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 NEURL4Q96JN8 1562 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 DAPK1P53355 1430 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 GOLGA6L10A6NI86 522 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 RLBP1P12271 317 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 RABL2AQ9UBK7 228 aaPredicted RBP5.55□□□□□ -1.52
HDDC2-208ENST00000609021 POLKQ9UBT6 870 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 G3BP2Q9UN86 482 aaKnown RBP5.55□□□□□ -1.52
HDDC2-208ENST00000609021 ITM2BQ9Y287 266 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 IVLP07476 585 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 RASA3Q14644 834 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 TTC30AQ86WT1 665 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 WDR63Q8IWG1 891 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 EFCAB13Q8IY85 973 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 TEX11Q8IYF3 940 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 PDILTQ8N807 584 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 MIPOL1Q8TD10 442 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC47Q96A33 483 aaKnown RBP5.55□□□□□ -1.52
HDDC2-208ENST00000609021 JPH4Q96JJ6 628 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 RUFY1Q96T51 708 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 SYCP2Q9BX26 1530 aa5.55□□□□□ -1.52
HDDC2-208ENST00000609021 FCHSD2O94868 740 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 SASH1O94885 1247 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 MIEF2Q96C03 454 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 SPOCK3Q9BQ16 436 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 CCNB3Q8WWL7 1395 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 PRDM15P57071 1507 aaPredicted RBP5.54□□□□□ -1.52
HDDC2-208ENST00000609021 SNUPNO95149 360 aaKnown RBP5.54□□□□□ -1.52
HDDC2-208ENST00000609021 BAG4O95429 457 aaKnown RBP5.54□□□□□ -1.52
HDDC2-208ENST00000609021 COPB2P35606 906 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 IFT88Q13099 833 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 NEDD9Q14511 834 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 JARID2Q92833 1246 aaPredicted RBP5.54□□□□□ -1.52
HDDC2-208ENST00000609021 UIMC1Q96RL1 719 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 CTNNA3Q9UI47 895 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 NUDCQ9Y266 331 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 RAB11FIP3O75154 756 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 NAT2P11245 290 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 KCNA2P16389 499 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 RPS6KA3P51812 740 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC178Q5BJE1 867 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 ARMC3Q5W041 872 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC65Q8IXS2 484 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 MRS2Q9HD23 443 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 INCENPQ9NQS7 918 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 WDR7Q9Y4E6 1490 aa5.54□□□□□ -1.52
HDDC2-208ENST00000609021 ZC3H13Q5T200 1668 aaKnown RBP5.54□□□□□ -1.52
HDDC2-208ENST00000609021 AP1G2O75843 785 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 KRT38O76015 456 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 FAM200BP0CF97 657 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 PRPHP41219 470 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 SPHKAPQ2M3C7 1700 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 KLHL10Q6JEL2 608 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 SRLQ86TD4 932 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 RAD50Q92878 1312 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 SPATA32Q96LK8 384 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 UBAP1Q9NZ09 502 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 BLOC1S6Q9UL45 172 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 THRAP3Q9Y2W1 955 aaKnown RBP5.53□□□□□ -1.52
HDDC2-208ENST00000609021 PCDHGA4Q9Y5G9 962 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 ZNF518AQ6AHZ1 1483 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 SYNRGQ9UMZ2 1314 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 IMPDH2P12268 514 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 GJA8P48165 433 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 GOLGA2Q08379 1002 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 TRIM29Q14134 588 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC80Q76M96 950 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 MYO6Q9UM54 1294 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 ROCK1Q13464 1354 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 RANBP1P43487 201 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 FILIP1LQ4L180 1135 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 ZNF394Q53GI3 561 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC73Q6ZRK6 1079 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 MICALCLQ6ZW33 695 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 GAS2L3Q86XJ1 694 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 NEK11Q8NG66 645 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 UHMK1Q8TAS1 419 aaKnown RBP5.53□□□□□ -1.52
HDDC2-208ENST00000609021 NUP133Q8WUM0 1156 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 ANKRD7Q92527 254 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 TAF4BQ92750 862 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 DDX12PQ92771 950 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 DDX11Q96FC9 970 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 TMEM165Q9HC07 324 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 FBXO9Q9UK97 447 aaPredicted RBP5.53□□□□□ -1.52
HDDC2-208ENST00000609021 TBC1D2BQ9UPU7 963 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 DIP2CQ9Y2E4 1556 aa5.53□□□□□ -1.52
HDDC2-208ENST00000609021 MYO1BO43795 1136 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 CDC37L1Q7L3B6 337 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 RNF168Q8IYW5 571 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 CTCFLQ8NI51 663 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 SNRNP27Q8WVK2 155 aaKnown RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 FAM107BQ9H098 131 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms