RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
CTCFL-220ENST00000608858 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-220ENST00000608858 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
CTCFL-220ENST00000608858 KIF24Q5T7B8 1368 aa12.88□□□□□ -0.35
CTCFL-220ENST00000608858 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
CTCFL-220ENST00000608858 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
CTCFL-220ENST00000608858 NPHP1O15259 732 aa12.87□□□□□ -0.35
CTCFL-220ENST00000608858 CST9Q5W186 159 aa12.87□□□□□ -0.35
CTCFL-220ENST00000608858 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
CTCFL-220ENST00000608858 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
CTCFL-220ENST00000608858 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-220ENST00000608858 ECE1P42892 770 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 POLA2Q14181 598 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-220ENST00000608858 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 FER1L6Q2WGJ9 1857 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
CTCFL-220ENST00000608858 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 COL15A1P39059 1388 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
CTCFL-220ENST00000608858 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
CTCFL-220ENST00000608858 SCN4AP35499 1836 aa12.83□□□□□ -0.35
CTCFL-220ENST00000608858 TJP1Q07157 1748 aa12.83□□□□□ -0.36
CTCFL-220ENST00000608858 SRGNP10124 158 aa12.83□□□□□ -0.36
CTCFL-220ENST00000608858 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
CTCFL-220ENST00000608858 MAP2K2P36507 400 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 EPS15P42566 896 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 MASTLQ96GX5 879 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 CACNA1SQ13698 1873 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
CTCFL-220ENST00000608858 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
CTCFL-220ENST00000608858 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
CTCFL-220ENST00000608858 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
CTCFL-220ENST00000608858 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
CTCFL-220ENST00000608858 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
CTCFL-220ENST00000608858 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTCFL-220ENST00000608858 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
CTCFL-220ENST00000608858 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
CTCFL-220ENST00000608858 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
CTCFL-220ENST00000608858 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
CTCFL-220ENST00000608858 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
CTCFL-220ENST00000608858 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
CTCFL-220ENST00000608858 FAM177BA6PVY3 158 aa12.79□□□□□ -0.36
CTCFL-220ENST00000608858 FZD9O00144 591 aa12.79□□□□□ -0.36
CTCFL-220ENST00000608858 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
CTCFL-220ENST00000608858 EIF5P55010 431 aaKnown RBP12.79□□□□□ -0.36
CTCFL-220ENST00000608858 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
CTCFL-220ENST00000608858 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
CTCFL-220ENST00000608858 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-220ENST00000608858 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
CTCFL-220ENST00000608858 ST5P78524 1137 aa12.78□□□□□ -0.36
CTCFL-220ENST00000608858 GPC2Q8N158 579 aa12.78□□□□□ -0.36
CTCFL-220ENST00000608858 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
CTCFL-220ENST00000608858 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-220ENST00000608858 A0A087WZG4 1122 aa12.77□□□□□ -0.37
CTCFL-220ENST00000608858 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.37
CTCFL-220ENST00000608858 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 TCERG1O14776 1098 aaKnown RBP12.76□□□□□ -0.37
CTCFL-220ENST00000608858 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
CTCFL-220ENST00000608858 CA12O43570 354 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 STARD3NLO95772 234 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 A1BGP04217 495 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
CTCFL-220ENST00000608858 DLK2Q6UY11 383 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
CTCFL-220ENST00000608858 NPR1P16066 1061 aa12.75□□□□□ -0.37
CTCFL-220ENST00000608858 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-220ENST00000608858 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-220ENST00000608858 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
CTCFL-220ENST00000608858 GLIS2Q9BZE0 524 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-220ENST00000608858 SCNN1DP51172 638 aa12.74□□□□□ -0.37
CTCFL-220ENST00000608858 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
CTCFL-220ENST00000608858 NBPF5PQ86XG9 351 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-220ENST00000608858 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
CTCFL-220ENST00000608858 TRPA1O75762 1119 aa12.73□□□□□ -0.37
CTCFL-220ENST00000608858 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-220ENST00000608858 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
CTCFL-220ENST00000608858 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
CTCFL-220ENST00000608858 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
CTCFL-220ENST00000608858 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
CTCFL-220ENST00000608858 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
CTCFL-220ENST00000608858 CDCA8Q53HL2 280 aa12.71□□□□□ -0.37
CTCFL-220ENST00000608858 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.37
CTCFL-220ENST00000608858 LARGE2Q8N3Y3 721 aa12.71□□□□□ -0.37
CTCFL-220ENST00000608858 ZNF496Q96IT1 587 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-220ENST00000608858 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
CTCFL-220ENST00000608858 HMOX1P09601 288 aa12.7□□□□□ -0.38
CTCFL-220ENST00000608858 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
CTCFL-220ENST00000608858 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
CTCFL-220ENST00000608858 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms