RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
ITGB5-212ENST00000608657 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
ITGB5-212ENST00000608657 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
ITGB5-212ENST00000608657 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
ITGB5-212ENST00000608657 DDX58O95786 925 aaKnown RBP11.31□□□□□ -0.6
ITGB5-212ENST00000608657 FLIIQ13045 1269 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 TTLL7Q6ZT98 887 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 G2E3Q7L622 706 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 COL23A1Q86Y22 540 aaPredicted RBP11.31□□□□□ -0.6
ITGB5-212ENST00000608657 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
ITGB5-212ENST00000608657 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
ITGB5-212ENST00000608657 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
ITGB5-212ENST00000608657 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
ITGB5-212ENST00000608657 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
ITGB5-212ENST00000608657 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
ITGB5-212ENST00000608657 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
ITGB5-212ENST00000608657 AFDNP55196 1824 aaKnown RBP11.3□□□□□ -0.6
ITGB5-212ENST00000608657 BCAR3O75815 825 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 PTPRCP08575 1304 aa11.29□□□□□ -0.6
ITGB5-212ENST00000608657 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
ITGB5-212ENST00000608657 ERVV-1B6SEH8 477 aa11.28□□□□□ -0.6
ITGB5-212ENST00000608657 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
ITGB5-212ENST00000608657 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
ITGB5-212ENST00000608657 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
ITGB5-212ENST00000608657 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
ITGB5-212ENST00000608657 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
ITGB5-212ENST00000608657 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
ITGB5-212ENST00000608657 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 PI4KAP2A4QPH2 592 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 RGL2O15211 777 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 GYS1P13807 737 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.61
ITGB5-212ENST00000608657 PI4KAP1Q8N8J0 262 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 PDGFDQ9GZP0 370 aaPredicted RBP11.27□□□□□ -0.61
ITGB5-212ENST00000608657 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
ITGB5-212ENST00000608657 MAP3K2Q9Y2U5 619 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 ADCY9O60503 1353 aa11.27□□□□□ -0.61
ITGB5-212ENST00000608657 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
ITGB5-212ENST00000608657 NEXNQ0ZGT2 675 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 HLFQ16534 295 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 DNAAF4Q8WXU2 420 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
ITGB5-212ENST00000608657 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
ITGB5-212ENST00000608657 ZBTB7AO95365 584 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.25□□□□□ -0.61
ITGB5-212ENST00000608657 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 MYD88Q99836 296 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
ITGB5-212ENST00000608657 MTFR1LQ9H019 292 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
ITGB5-212ENST00000608657 F6X3S4 739 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 GPTP24298 496 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 SLC4A10Q6U841 1118 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
ITGB5-212ENST00000608657 CARMIL3Q8ND23 1372 aa11.24□□□□□ -0.61
ITGB5-212ENST00000608657 TRIM27P14373 513 aa11.23□□□□□ -0.61
ITGB5-212ENST00000608657 POLD1P28340 1107 aa11.23□□□□□ -0.61
ITGB5-212ENST00000608657 FTSJ3Q8IY81 847 aaKnown RBP11.23□□□□□ -0.61
ITGB5-212ENST00000608657 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
ITGB5-212ENST00000608657 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
ITGB5-212ENST00000608657 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 MMP10P09238 476 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 MS4A1P11836 297 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 NFIXQ14938 502 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 NRXN2Q9P2S2 1712 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
ITGB5-212ENST00000608657 LAMB2P55268 1798 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.61
ITGB5-212ENST00000608657 ABCC4O15439 1325 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 UBN2Q6ZU65 1347 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 NPHP1O15259 732 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 TM4SF1P30408 202 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
ITGB5-212ENST00000608657 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
ITGB5-212ENST00000608657 DDR1Q08345 913 aa11.21□□□□□ -0.61
ITGB5-212ENST00000608657 CWF19L2Q2TBE0 894 aaKnown RBP11.21□□□□□ -0.61
ITGB5-212ENST00000608657 DZIP1LQ8IYY4 767 aaKnown RBP11.21□□□□□ -0.61
ITGB5-212ENST00000608657 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms