RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 KANK3Q6NY19 840 aa7.35□□□□□ -1.23
LINC00343-210ENST00000608220 BEND7Q8N7W2 519 aaPredicted RBP7.35□□□□□ -1.23
LINC00343-210ENST00000608220 GOLGA6L1Q8N7Z2 621 aa7.35□□□□□ -1.23
LINC00343-210ENST00000608220 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
LINC00343-210ENST00000608220 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
LINC00343-210ENST00000608220 CFTRP13569 1480 aa7.35□□□□□ -1.23
LINC00343-210ENST00000608220 TOP2AP11388 1531 aaKnown RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 SFI1A8K8P3 1242 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 CD33P20138 364 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 AMPD1P23109 780 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 TSEN2Q8NCE0 465 aaKnown RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 EDARADDQ8WWZ3 215 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 TSPAN10Q9H1Z9 355 aaPredicted RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 GGA1Q9UJY5 639 aa7.34□□□□□ -1.23
LINC00343-210ENST00000608220 MAFBQ9Y5Q3 323 aaPredicted RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
LINC00343-210ENST00000608220 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
LINC00343-210ENST00000608220 TNP2Q05952 138 aa7.33□□□□□ -1.24
LINC00343-210ENST00000608220 SH3PXD2AQ5TCZ1 1133 aa7.33□□□□□ -1.24
LINC00343-210ENST00000608220 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
LINC00343-210ENST00000608220 LRRC69Q6ZNQ3 347 aa7.33□□□□□ -1.24
LINC00343-210ENST00000608220 C1orf229Q6ZS94 237 aaPredicted RBP7.33□□□□□ -1.24
LINC00343-210ENST00000608220 NEURL1BA8MQ27 555 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 PSMA6P60900 246 aaKnown RBP7.32□□□□□ -1.24
LINC00343-210ENST00000608220 SIX5Q8N196 739 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 RHPN1Q8TCX5 695 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 PPP1R12CQ9BZL4 782 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 PRR12Q9ULL5 1215 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
LINC00343-210ENST00000608220 PPP1R12BO60237 982 aaPredicted RBP7.31□□□□□ -1.24
LINC00343-210ENST00000608220 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
LINC00343-210ENST00000608220 ZNF777Q9ULD5 760 aaPredicted RBP7.31□□□□□ -1.24
LINC00343-210ENST00000608220 M0R2N6 131 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 EML1O00423 815 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 FAM157BP0CG42 384 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 ARAFP10398 606 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 SEC13P55735 322 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 SNRPNP63162 240 aaKnown RBP7.3□□□□□ -1.24
LINC00343-210ENST00000608220 SLCO4C1Q6ZQN7 724 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 CHMP7Q8WUX9 453 aaPredicted RBP7.3□□□□□ -1.24
LINC00343-210ENST00000608220 HINFPQ9BQA5 517 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 MARK1Q9P0L2 795 aa7.3□□□□□ -1.24
LINC00343-210ENST00000608220 LGR5O75473 907 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 SAMD5Q5TGI4 173 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 SCG3Q8WXD2 468 aaKnown RBP7.29□□□□□ -1.24
LINC00343-210ENST00000608220 PHACTR1Q9C0D0 580 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 VRTNQ9H8Y1 702 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 STRN4Q9NRL3 753 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 MKL2Q9ULH7 1088 aa7.29□□□□□ -1.24
LINC00343-210ENST00000608220 URB2Q14146 1524 aaKnown RBP7.28□□□□□ -1.24
LINC00343-210ENST00000608220 EPXP11678 715 aa7.28□□□□□ -1.24
LINC00343-210ENST00000608220 ADH6P28332 368 aa7.28□□□□□ -1.24
LINC00343-210ENST00000608220 PCBP4P57723 403 aaKnown RBP7.28□□□□□ -1.24
LINC00343-210ENST00000608220 CRTC2Q53ET0 693 aaPredicted RBP7.28□□□□□ -1.24
LINC00343-210ENST00000608220 FAM182BQ5T319 152 aa7.28□□□□□ -1.24
LINC00343-210ENST00000608220 HCN2Q9UL51 889 aa7.28□□□□□ -1.24
LINC00343-210ENST00000608220 ATAD2Q6PL18 1390 aa7.28□□□□□ -1.24
LINC00343-210ENST00000608220 DKK1O94907 266 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 DPYDQ12882 1025 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 LAMC2Q13753 1193 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 C1orf53Q5VUE5 145 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 HSH2DQ96JZ2 352 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 BTBD6Q96KE9 485 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 ANKIB1Q9P2G1 1089 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 GPC6Q9Y625 555 aaPredicted RBP7.27□□□□□ -1.25
LINC00343-210ENST00000608220 IFT140Q96RY7 1462 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 ABCC8Q09428 1581 aa7.27□□□□□ -1.25
LINC00343-210ENST00000608220 EFSO43281 561 aa7.26□□□□□ -1.25
LINC00343-210ENST00000608220 C21orf2O43822 256 aa7.26□□□□□ -1.25
LINC00343-210ENST00000608220 PTK7Q13308 1070 aa7.26□□□□□ -1.25
LINC00343-210ENST00000608220 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
LINC00343-210ENST00000608220 DCAF5Q96JK2 942 aa7.26□□□□□ -1.25
LINC00343-210ENST00000608220 RSF1Q96T23 1441 aaPredicted RBP7.26□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L15C9J2P7 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L10C9JJH3 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L13C9JLJ4 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L12C9JPN9 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L11C9JVI0 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L21D6R901 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L18D6R9N7 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L22D6RA61 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L17D6RBQ6 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L19D6RCP7 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L20D6RJB6 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 HIRAP54198 1017 aaPredicted RBP7.25□□□□□ -1.25
LINC00343-210ENST00000608220 USP17L24Q0WX57 530 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
LINC00343-210ENST00000608220 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
LINC00343-210ENST00000608220 ANKMY2Q8IV38 441 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 ALDH16A1Q8IZ83 802 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 C7orf43Q8WVR3 580 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
LINC00343-210ENST00000608220 KLF15Q9UIH9 416 aa7.25□□□□□ -1.25
LINC00343-210ENST00000608220 FAM196BA6NMK8 535 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms