RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 A0A087WZG4 1122 aa13.61□□□□□ -0.23
LINC01001-203ENST00000607448 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
LINC01001-203ENST00000607448 SERPINB2P05120 415 aa13.6□□□□□ -0.23
LINC01001-203ENST00000607448 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
LINC01001-203ENST00000607448 BCS1LQ9Y276 419 aa13.6□□□□□ -0.23
LINC01001-203ENST00000607448 SBF1O95248 1867 aa13.6□□□□□ -0.23
LINC01001-203ENST00000607448 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
LINC01001-203ENST00000607448 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
LINC01001-203ENST00000607448 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
LINC01001-203ENST00000607448 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
LINC01001-203ENST00000607448 KRT24Q2M2I5 525 aa13.58□□□□□ -0.24
LINC01001-203ENST00000607448 TNRC6CQ9HCJ0 1690 aaKnown RBP13.58□□□□□ -0.24
LINC01001-203ENST00000607448 ARFGEF2Q9Y6D5 1785 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 HLFQ16534 295 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 NGEFQ8N5V2 710 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 ANKRD36CQ5JPF3 1778 aa13.57□□□□□ -0.24
LINC01001-203ENST00000607448 ADCY9O60503 1353 aa13.56□□□□□ -0.24
LINC01001-203ENST00000607448 MYL6BP14649 208 aa13.56□□□□□ -0.24
LINC01001-203ENST00000607448 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
LINC01001-203ENST00000607448 APAF1O14727 1248 aa13.55□□□□□ -0.24
LINC01001-203ENST00000607448 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
LINC01001-203ENST00000607448 PIM2Q9P1W9 311 aa13.55□□□□□ -0.24
LINC01001-203ENST00000607448 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
LINC01001-203ENST00000607448 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
LINC01001-203ENST00000607448 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 CHL1O00533 1208 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 ANXA1P04083 346 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
LINC01001-203ENST00000607448 PDIA6Q15084 440 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 LRP10Q7Z4F1 713 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 SETDB2Q96T68 719 aa13.54□□□□□ -0.24
LINC01001-203ENST00000607448 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
LINC01001-203ENST00000607448 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
LINC01001-203ENST00000607448 CLEC4GQ6UXB4 293 aa13.53□□□□□ -0.24
LINC01001-203ENST00000607448 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
LINC01001-203ENST00000607448 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.24
LINC01001-203ENST00000607448 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
LINC01001-203ENST00000607448 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
LINC01001-203ENST00000607448 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.25
LINC01001-203ENST00000607448 CNBD1Q8NA66 436 aa13.52□□□□□ -0.25
LINC01001-203ENST00000607448 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
LINC01001-203ENST00000607448 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC01001-203ENST00000607448 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
LINC01001-203ENST00000607448 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
LINC01001-203ENST00000607448 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
LINC01001-203ENST00000607448 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
LINC01001-203ENST00000607448 LAMB2P55268 1798 aa13.51□□□□□ -0.25
LINC01001-203ENST00000607448 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
LINC01001-203ENST00000607448 MS4A1P11836 297 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 MBIPQ9NS73 344 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
LINC01001-203ENST00000607448 H0YIN7 160 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 PRELPP51888 382 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-203ENST00000607448 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
LINC01001-203ENST00000607448 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 RASSF7Q02833 373 aa13.49□□□□□ -0.25
LINC01001-203ENST00000607448 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 RGL2O15211 777 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 NPHP1O15259 732 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 GPTP24298 496 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 PDE6BP35913 854 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
LINC01001-203ENST00000607448 ST5P78524 1137 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 KIF6Q6ZMV9 814 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
LINC01001-203ENST00000607448 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.48□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01001-203ENST00000607448 SRGNP10124 158 aa13.47□□□□□ -0.25
LINC01001-203ENST00000607448 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
LINC01001-203ENST00000607448 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
LINC01001-203ENST00000607448 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
LINC01001-203ENST00000607448 C9orf131Q5VYM1 1079 aa13.46□□□□□ -0.25
LINC01001-203ENST00000607448 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
LINC01001-203ENST00000607448 ZNF34Q8IZ26 560 aa13.46□□□□□ -0.25
LINC01001-203ENST00000607448 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
LINC01001-203ENST00000607448 TAF1P21675 1872 aa13.46□□□□□ -0.25
LINC01001-203ENST00000607448 DDX60Q8IY21 1712 aaKnown RBP13.46□□□□□ -0.26
LINC01001-203ENST00000607448 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
LINC01001-203ENST00000607448 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms