RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 TAF1LQ8IZX4 1826 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 F6X3S4 739 aa20.35■□□□□ 0.85
CNN2-212ENST00000607102 ALDH1L1O75891 902 aa20.35■□□□□ 0.85
CNN2-212ENST00000607102 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
CNN2-212ENST00000607102 CCDC125Q86Z20 511 aa20.35■□□□□ 0.85
CNN2-212ENST00000607102 AK7Q96M32 723 aa20.35■□□□□ 0.85
CNN2-212ENST00000607102 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
CNN2-212ENST00000607102 EIF5P55010 431 aaKnown RBP20.34■□□□□ 0.85
CNN2-212ENST00000607102 TXNRD1Q16881 649 aa20.34■□□□□ 0.85
CNN2-212ENST00000607102 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
CNN2-212ENST00000607102 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
CNN2-212ENST00000607102 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
CNN2-212ENST00000607102 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
CNN2-212ENST00000607102 ERVV-1B6SEH8 477 aa20.33■□□□□ 0.85
CNN2-212ENST00000607102 BAG6P46379 1132 aa20.33■□□□□ 0.85
CNN2-212ENST00000607102 ARXQ96QS3 562 aa20.33■□□□□ 0.85
CNN2-212ENST00000607102 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
CNN2-212ENST00000607102 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
CNN2-212ENST00000607102 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.84
CNN2-212ENST00000607102 COL15A1P39059 1388 aa20.33■□□□□ 0.84
CNN2-212ENST00000607102 RGL2O15211 777 aa20.32■□□□□ 0.84
CNN2-212ENST00000607102 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
CNN2-212ENST00000607102 GNAI3P08754 354 aa20.32■□□□□ 0.84
CNN2-212ENST00000607102 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
CNN2-212ENST00000607102 NUP188Q5SRE5 1749 aa20.31■□□□□ 0.84
CNN2-212ENST00000607102 GNPATO15228 680 aa20.31■□□□□ 0.84
CNN2-212ENST00000607102 ADRA2BP18089 450 aa20.31■□□□□ 0.84
CNN2-212ENST00000607102 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
CNN2-212ENST00000607102 ZNF652Q9Y2D9 606 aa20.31■□□□□ 0.84
CNN2-212ENST00000607102 MYH14Q7Z406 1995 aaKnown RBP20.3■□□□□ 0.84
CNN2-212ENST00000607102 TTLL7Q6ZT98 887 aa20.3■□□□□ 0.84
CNN2-212ENST00000607102 ZBTB7BO15156 539 aaPredicted RBP20.29■□□□□ 0.84
CNN2-212ENST00000607102 CCDC136Q96JN2 1154 aa20.29■□□□□ 0.84
CNN2-212ENST00000607102 MYD88Q99836 296 aa20.29■□□□□ 0.84
CNN2-212ENST00000607102 ZBTB3Q9H5J0 574 aa20.29■□□□□ 0.84
CNN2-212ENST00000607102 KCNQ4P56696 695 aa20.28■□□□□ 0.84
CNN2-212ENST00000607102 GIGYF2Q6Y7W6 1299 aaKnown RBP20.28■□□□□ 0.84
CNN2-212ENST00000607102 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
CNN2-212ENST00000607102 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
CNN2-212ENST00000607102 EP400Q96L91 3159 aa20.28■□□□□ 0.84
CNN2-212ENST00000607102 C9orf78Q9NZ63 289 aaPredicted RBP20.27■□□□□ 0.84
CNN2-212ENST00000607102 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
CNN2-212ENST00000607102 SSFA2P28290 1259 aa20.26■□□□□ 0.83
CNN2-212ENST00000607102 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
CNN2-212ENST00000607102 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
CNN2-212ENST00000607102 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
CNN2-212ENST00000607102 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
CNN2-212ENST00000607102 ZPR1O75312 459 aa20.25■□□□□ 0.83
CNN2-212ENST00000607102 TRIM28Q13263 835 aaKnown RBP20.25■□□□□ 0.83
CNN2-212ENST00000607102 TRAPPC3LQ5T215 181 aa20.25■□□□□ 0.83
CNN2-212ENST00000607102 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
CNN2-212ENST00000607102 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
CNN2-212ENST00000607102 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
CNN2-212ENST00000607102 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
CNN2-212ENST00000607102 ANKRD36CQ5JPF3 1778 aa20.24■□□□□ 0.83
CNN2-212ENST00000607102 BCORQ6W2J9 1755 aa20.24■□□□□ 0.83
CNN2-212ENST00000607102 GNAI2P04899 355 aa20.24■□□□□ 0.83
CNN2-212ENST00000607102 RFC4P35249 363 aa20.24■□□□□ 0.83
CNN2-212ENST00000607102 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 GRM8O00222 908 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 CAMTA2O94983 1202 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 GCKRQ14397 625 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 PROM2Q8N271 834 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 MEIS3Q99687 375 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
CNN2-212ENST00000607102 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
CNN2-212ENST00000607102 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 USP44Q9H0E7 712 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 NUP98P52948 1817 aa20.22■□□□□ 0.83
CNN2-212ENST00000607102 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
CNN2-212ENST00000607102 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
CNN2-212ENST00000607102 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
CNN2-212ENST00000607102 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
CNN2-212ENST00000607102 UTYO14607 1347 aa20.21■□□□□ 0.83
CNN2-212ENST00000607102 ATP5J2-PTCD1G3V325 749 aa20.2■□□□□ 0.82
CNN2-212ENST00000607102 HSP90B1P14625 803 aaKnown RBP20.2■□□□□ 0.82
CNN2-212ENST00000607102 RPAP2Q8IXW5 612 aaPredicted RBP20.2■□□□□ 0.82
CNN2-212ENST00000607102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
CNN2-212ENST00000607102 HMMRO75330 724 aa20.19■□□□□ 0.82
CNN2-212ENST00000607102 PHF14O94880 888 aa20.19■□□□□ 0.82
CNN2-212ENST00000607102 EZH2Q15910 746 aaKnown RBP20.19■□□□□ 0.82
CNN2-212ENST00000607102 ARHGEF1Q92888 912 aaKnown RBP20.19■□□□□ 0.82
CNN2-212ENST00000607102 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
CNN2-212ENST00000607102 USP42Q9H9J4 1324 aaKnown RBP20.19■□□□□ 0.82
CNN2-212ENST00000607102 HLFQ16534 295 aa20.18■□□□□ 0.82
CNN2-212ENST00000607102 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
CNN2-212ENST00000607102 C4AP0C0L4 1744 aa20.18■□□□□ 0.82
CNN2-212ENST00000607102 B4GALNT3Q6L9W6 998 aa20.17■□□□□ 0.82
CNN2-212ENST00000607102 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
CNN2-212ENST00000607102 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
CNN2-212ENST00000607102 ZNF34Q8IZ26 560 aa20.17■□□□□ 0.82
CNN2-212ENST00000607102 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
CNN2-212ENST00000607102 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
CNN2-212ENST00000607102 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms