RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PIP4K2AP48426 406 aaPredicted RBP20.89■□□□□ 0.93
PMF1-206ENST00000606952 EIF5P55010 431 aaKnown RBP20.89■□□□□ 0.93
PMF1-206ENST00000606952 BEND3Q5T5X7 828 aa20.89■□□□□ 0.93
PMF1-206ENST00000606952 SCN7AQ01118 1682 aa20.89■□□□□ 0.93
PMF1-206ENST00000606952 UBR3Q6ZT12 1888 aa20.88■□□□□ 0.93
PMF1-206ENST00000606952 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
PMF1-206ENST00000606952 ANKRD13DQ6ZTN6 518 aa20.88■□□□□ 0.93
PMF1-206ENST00000606952 ZBTB40Q9NUA8 1239 aa20.88■□□□□ 0.93
PMF1-206ENST00000606952 MAP3K2Q9Y2U5 619 aa20.88■□□□□ 0.93
PMF1-206ENST00000606952 RGL2O15211 777 aa20.87■□□□□ 0.93
PMF1-206ENST00000606952 ALDH1L1O75891 902 aa20.87■□□□□ 0.93
PMF1-206ENST00000606952 METTL22Q9BUU2 404 aaPredicted RBP20.87■□□□□ 0.93
PMF1-206ENST00000606952 NUP98P52948 1817 aa20.87■□□□□ 0.93
PMF1-206ENST00000606952 AIMP1Q12904 312 aaKnown RBP20.86■□□□□ 0.93
PMF1-206ENST00000606952 TTLL7Q6ZT98 887 aa20.86■□□□□ 0.93
PMF1-206ENST00000606952 C4AP0C0L4 1744 aa20.85■□□□□ 0.93
PMF1-206ENST00000606952 LINS1Q8NG48 757 aa20.85■□□□□ 0.93
PMF1-206ENST00000606952 SRCIN1Q9C0H9 1055 aa20.85■□□□□ 0.93
PMF1-206ENST00000606952 LRRC4BQ9NT99 713 aa20.85■□□□□ 0.93
PMF1-206ENST00000606952 COL15A1P39059 1388 aa20.85■□□□□ 0.93
PMF1-206ENST00000606952 MAP3K15Q6ZN16 1313 aa20.84■□□□□ 0.93
PMF1-206ENST00000606952 ERVV-1B6SEH8 477 aa20.84■□□□□ 0.93
PMF1-206ENST00000606952 SLC4A10Q6U841 1118 aa20.84■□□□□ 0.93
PMF1-206ENST00000606952 RIC3Q7Z5B4 369 aa20.84■□□□□ 0.93
PMF1-206ENST00000606952 RPS6KA4O75676 772 aa20.83■□□□□ 0.93
PMF1-206ENST00000606952 UTYO14607 1347 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 A0A087WZG4 1122 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 IGKV5-2P06315 115 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 TXNRD1Q16881 649 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 PROM2Q8N271 834 aa20.82■□□□□ 0.92
PMF1-206ENST00000606952 APBA3O96018 575 aa20.81■□□□□ 0.92
PMF1-206ENST00000606952 TRIM28Q13263 835 aaKnown RBP20.81■□□□□ 0.92
PMF1-206ENST00000606952 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
PMF1-206ENST00000606952 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
PMF1-206ENST00000606952 NEURL1BA8MQ27 555 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 GNAI3P08754 354 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 KCNQ4P56696 695 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
PMF1-206ENST00000606952 MEIS3Q99687 375 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 USP44Q9H0E7 712 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
PMF1-206ENST00000606952 HSP90AB3PQ58FF7 597 aa20.79■□□□□ 0.92
PMF1-206ENST00000606952 ISCA1Q9BUE6 129 aa20.79■□□□□ 0.92
PMF1-206ENST00000606952 CAMTA2O94983 1202 aa20.78■□□□□ 0.92
PMF1-206ENST00000606952 ADRA2BP18089 450 aa20.78■□□□□ 0.92
PMF1-206ENST00000606952 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
PMF1-206ENST00000606952 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
PMF1-206ENST00000606952 TCIRG1Q13488 830 aa20.77■□□□□ 0.92
PMF1-206ENST00000606952 MYD88Q99836 296 aa20.77■□□□□ 0.92
PMF1-206ENST00000606952 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
PMF1-206ENST00000606952 GNPATO15228 680 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 GCKRQ14397 625 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
PMF1-206ENST00000606952 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
PMF1-206ENST00000606952 CCDC191Q8NCU4 936 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 CCDC136Q96JN2 1154 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 RTCBQ9Y3I0 505 aaKnown RBP20.76■□□□□ 0.91
PMF1-206ENST00000606952 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
PMF1-206ENST00000606952 HDAC1Q13547 482 aaPredicted RBP20.75■□□□□ 0.91
PMF1-206ENST00000606952 CLEC4GQ6UXB4 293 aa20.75■□□□□ 0.91
PMF1-206ENST00000606952 ZNF330Q9Y3S2 320 aaPredicted RBP20.75■□□□□ 0.91
PMF1-206ENST00000606952 GRM8O00222 908 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 SSFA2P28290 1259 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 HLFQ16534 295 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 CCDC125Q86Z20 511 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 AKT1S1Q96B36 256 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 AK7Q96M32 723 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 TBC1D2BQ9UPU7 963 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 HDAC5Q9UQL6 1122 aa20.74■□□□□ 0.91
PMF1-206ENST00000606952 GNAI2P04899 355 aa20.73■□□□□ 0.91
PMF1-206ENST00000606952 UBTFL1P0CB47 393 aaPredicted RBP20.73■□□□□ 0.91
PMF1-206ENST00000606952 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
PMF1-206ENST00000606952 RPAP2Q8IXW5 612 aaPredicted RBP20.73■□□□□ 0.91
PMF1-206ENST00000606952 ZNF34Q8IZ26 560 aa20.73■□□□□ 0.91
PMF1-206ENST00000606952 LAMB2P55268 1798 aa20.72■□□□□ 0.91
PMF1-206ENST00000606952 NBPF7P0C2Y1 421 aaPredicted RBP20.72■□□□□ 0.91
PMF1-206ENST00000606952 CASP7P55210 303 aa20.72■□□□□ 0.91
PMF1-206ENST00000606952 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
PMF1-206ENST00000606952 AMIGO3Q86WK7 504 aa20.72■□□□□ 0.91
PMF1-206ENST00000606952 ANKRD44Q8N8A2 993 aa20.72■□□□□ 0.91
PMF1-206ENST00000606952 CWC25Q9NXE8 425 aaPredicted RBP20.72■□□□□ 0.91
PMF1-206ENST00000606952 H7C1W4 665 aa20.71■□□□□ 0.91
PMF1-206ENST00000606952 CEP85Q6P2H3 762 aa20.71■□□□□ 0.91
PMF1-206ENST00000606952 ZNF652Q9Y2D9 606 aa20.71■□□□□ 0.91
PMF1-206ENST00000606952 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
PMF1-206ENST00000606952 ATP5J2-PTCD1G3V325 749 aa20.7■□□□□ 0.9
PMF1-206ENST00000606952 BAG6P46379 1132 aa20.7■□□□□ 0.9
PMF1-206ENST00000606952 MTX1Q13505 466 aa20.7■□□□□ 0.9
PMF1-206ENST00000606952 ILDR2Q71H61 639 aa20.7■□□□□ 0.9
PMF1-206ENST00000606952 CENPQQ7L2Z9 268 aaPredicted RBP20.7■□□□□ 0.9
PMF1-206ENST00000606952 C9orf78Q9NZ63 289 aaPredicted RBP20.7■□□□□ 0.9
PMF1-206ENST00000606952 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
PMF1-206ENST00000606952 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
PMF1-206ENST00000606952 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
PMF1-206ENST00000606952 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
PMF1-206ENST00000606952 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms