RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 LMO7Q8WWI1 1683 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 KDM3BQ7LBC6 1761 aa19.41■□□□□ 0.7
CTSA-214ENST00000606788 PI4K2BQ8TCG2 481 aa19.4■□□□□ 0.7
CTSA-214ENST00000606788 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
CTSA-214ENST00000606788 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
CTSA-214ENST00000606788 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
CTSA-214ENST00000606788 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
CTSA-214ENST00000606788 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.7
CTSA-214ENST00000606788 G3BP1Q13283 466 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTSA-214ENST00000606788 CPA1P15085 419 aa19.39■□□□□ 0.69
CTSA-214ENST00000606788 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
CTSA-214ENST00000606788 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
CTSA-214ENST00000606788 A0A087WZG4 1122 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 RAB11FIP3O75154 756 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 ALDH1L1O75891 902 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 GCKRQ14397 625 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 NBPF26B4DH59 902 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 SASH1O94885 1247 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 NBPF14Q5TI25 921 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 NBPF10Q6P3W6 841 aaKnown RBP19.38■□□□□ 0.69
CTSA-214ENST00000606788 NBPF15Q8N660 670 aa19.38■□□□□ 0.69
CTSA-214ENST00000606788 EAF2Q96CJ1 260 aaPredicted RBP19.38■□□□□ 0.69
CTSA-214ENST00000606788 CAMTA1Q9Y6Y1 1673 aa19.37■□□□□ 0.69
CTSA-214ENST00000606788 STAP2Q9UGK3 403 aa19.37■□□□□ 0.69
CTSA-214ENST00000606788 CACNA1FO60840 1977 aa19.37■□□□□ 0.69
CTSA-214ENST00000606788 TRAK2O60296 914 aa19.37■□□□□ 0.69
CTSA-214ENST00000606788 IL2RBP14784 551 aa19.37■□□□□ 0.69
CTSA-214ENST00000606788 ST18O60284 1047 aa19.36■□□□□ 0.69
CTSA-214ENST00000606788 PXDNLA1KZ92 1463 aa19.36■□□□□ 0.69
CTSA-214ENST00000606788 CHGBP05060 677 aa19.36■□□□□ 0.69
CTSA-214ENST00000606788 METTL22Q9BUU2 404 aaPredicted RBP19.36■□□□□ 0.69
CTSA-214ENST00000606788 ADAMTS2O95450 1211 aa19.35■□□□□ 0.69
CTSA-214ENST00000606788 PHRF1Q9P1Y6 1649 aaKnown RBP19.34■□□□□ 0.69
CTSA-214ENST00000606788 LMTK3Q96Q04 1460 aa19.34■□□□□ 0.69
CTSA-214ENST00000606788 DCCP43146 1447 aa19.34■□□□□ 0.69
CTSA-214ENST00000606788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSA-214ENST00000606788 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
CTSA-214ENST00000606788 CNTROBQ8N137 903 aa19.34■□□□□ 0.69
CTSA-214ENST00000606788 DIAPH3Q9NSV4 1193 aa19.34■□□□□ 0.69
CTSA-214ENST00000606788 ASAP1Q9ULH1 1129 aa19.34■□□□□ 0.69
CTSA-214ENST00000606788 DDIT3P35638 169 aa19.33■□□□□ 0.69
CTSA-214ENST00000606788 HSP90AB4PQ58FF6 505 aa19.33■□□□□ 0.68
CTSA-214ENST00000606788 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 ECHDC1Q9NTX5 307 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
CTSA-214ENST00000606788 LMBR1LQ6UX01 489 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 FAM227BQ96M60 508 aa19.32■□□□□ 0.68
CTSA-214ENST00000606788 MCCP23508 829 aa19.31■□□□□ 0.68
CTSA-214ENST00000606788 ZNF594Q96JF6 807 aaPredicted RBP19.31■□□□□ 0.68
CTSA-214ENST00000606788 RAB3GAP1Q15042 981 aa19.31■□□□□ 0.68
CTSA-214ENST00000606788 RASEFQ8IZ41 740 aa19.31■□□□□ 0.68
CTSA-214ENST00000606788 TFCP2Q12800 502 aa19.31■□□□□ 0.68
CTSA-214ENST00000606788 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
CTSA-214ENST00000606788 PTH1RQ03431 593 aa19.3■□□□□ 0.68
CTSA-214ENST00000606788 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
CTSA-214ENST00000606788 KIAA1211Q6ZU35 1233 aa19.3■□□□□ 0.68
CTSA-214ENST00000606788 C5P01031 1676 aa19.3■□□□□ 0.68
CTSA-214ENST00000606788 COL18A1P39060 1754 aa19.3■□□□□ 0.68
CTSA-214ENST00000606788 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
CTSA-214ENST00000606788 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
CTSA-214ENST00000606788 GLRX3O76003 335 aaKnown RBP19.3■□□□□ 0.68
CTSA-214ENST00000606788 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
CTSA-214ENST00000606788 DNAJC2Q99543 621 aaKnown RBP19.29■□□□□ 0.68
CTSA-214ENST00000606788 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 NCOA3Q9Y6Q9 1424 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 CPDO75976 1380 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 KCNJ4P48050 445 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 MTX1Q13505 466 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
CTSA-214ENST00000606788 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 TCEANC2Q96MN5 208 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 NEUROD6Q96NK8 337 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
CTSA-214ENST00000606788 SGSM2O43147 1006 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 GPTP24298 496 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 COL9A3Q14050 684 aaPredicted RBP19.28■□□□□ 0.68
CTSA-214ENST00000606788 SYNE4Q8N205 404 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
CTSA-214ENST00000606788 OVOS2A0A0G2JMS6 1433 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
CTSA-214ENST00000606788 FSD1Q9BTV5 496 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
CTSA-214ENST00000606788 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
CTSA-214ENST00000606788 GPATCH3Q96I76 525 aa19.27■□□□□ 0.68
CTSA-214ENST00000606788 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
CTSA-214ENST00000606788 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
CTSA-214ENST00000606788 PIGBQ92521 554 aa19.26■□□□□ 0.67
CTSA-214ENST00000606788 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
CTSA-214ENST00000606788 DBNDD2Q9BQY9 259 aa19.26■□□□□ 0.67
CTSA-214ENST00000606788 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
CTSA-214ENST00000606788 SCN11AQ9UI33 1791 aa19.25■□□□□ 0.67
CTSA-214ENST00000606788 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
CTSA-214ENST00000606788 ERC1Q8IUD2 1116 aa19.25■□□□□ 0.67
CTSA-214ENST00000606788 PLBD2Q8NHP8 589 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms